Evidence map›Paper›PMID 19004808›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Horizontal gene transfer of the algal nuclear gene psbO to the photosynthetic sea slug Elysia chlorotica.

Mary E Rumpho, Jared M Worful, Jungho Lee, Krishna Kannan, Mary S Tyler, Debashish Bhattacharya, Ahmed Moustafa, James R Manhart

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
24.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 258 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Carotenoid modifying enzymes in metazoans.Methods in enzymology · 2022
    Article
  11. Article
  12. Horizontal Gene Transfers in Plants.Life (Basel, Switzerland) · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Horizontal Gene Transfer Involving Chloroplasts.International journal of molecular sciences · 2021
    Review
  17. Review
  18. Article
  19. Article
  20. Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Mary E RumphoDepartment of Biochemistry, Microbiology, and Molecular Biology, University of Maine, Orono, ME 04469, USA. mrumpho@umit.maine.edu
Jared M Worful
Jungho Lee
Krishna Kannan
Mary S Tyler
Debashish Bhattacharya
Ahmed Moustafa
James R Manhart
University of Maine · USUniversity of Iowa · USSeoul National University · KRTexas A&M University · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008629 · NIGMS · UNIVERSITY OF IOWA · PI EBERL, DANIEL F · 1997 to 2021
$4.1M
Developing genomic resources:the toxic dinoflagellateR01ES013679 · NIEHS · UNIVERSITY OF IOWA · PI BHATTACHARYA, DEBASHISH · 2006 to 2008
$1.1M
NIEHS NIH HHS R01 ES013679NIEHS NIH HHS R01ES013679NIGMS NIH HHS T32 GM008629
6 · The paper itself

Abstract

The sea slug Elysia chlorotica acquires plastids by ingestion of its algal food source Vaucheria litorea. Organelles are sequestered in the mollusc's digestive epithelium, where they photosynthesize for months in the absence of algal nucleocytoplasm. This is perplexing because plastid metabolism depends on the nuclear genome for >90% of the needed proteins. Two possible explanations for the persistence of photosynthesis in the sea slug are (i) the ability of V. litorea plastids to retain genetic autonomy and/or (ii) more likely, the mollusc provides the essential plastid proteins. Under the latter scenario, genes supporting photosynthesis have been acquired by the animal via horizontal gene transfer and the encoded proteins are retargeted to the plastid. We sequenced the plastid genome and confirmed that it lacks the full complement of genes required for photosynthesis. In support of the second scenario, we demonstrated that a nuclear gene of oxygenic photosynthesis, psbO, is expressed in the sea slug and has integrated into the germline. The source of psbO in the sea slug is V. litorea because this sequence is identical from the predator and prey genomes. Evidence that the transferred gene has integrated into sea slug nuclear DNA comes from the finding of a highly diverged psbO 3' flanking sequence in the algal and mollusc nuclear homologues and gene absence from the mitochondrial genome of E. chlorotica. We demonstrate that foreign organelle retention generates metabolic novelty ("green animals") and is explained by anastomosis of distinct branches of the tree of life driven by predation and horizontal gene transfer.

Indexed as

Algal ProteinsAmino Acid SequenceAnimalsCell NucleusDNA, MitochondrialEukaryotaGastropodaGene Expression RegulationGene Transfer, HorizontalMolecular Sequence DataOceans and SeasPhotosynthesisPlastidsRecombination, GeneticAlgal ProteinsDNA, Mitochondrial

Identifiers

PMID19004808
PMCPMC2584685
OpenAlexW2120497576

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.