Evidence map›Paper›PMID 19004762›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Real-time luminescence monitoring of cell-cycle and respiratory oscillations in yeast.

J Brian Robertson, Chris C Stowers, Erik Boczko, Carl Hirschie Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 66 citations in OpenAlex.

  1. Novel Insights intoJournal of fungi (Basel, Switzerland) · 2022
    Review
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  7. A bioluminescent reporter for the halophilic archaeon Haloferax volcanii.Extremophiles : life under extreme conditions · 2020
    Article
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  20. Visible light alters yeast metabolic rhythms by inhibiting respiration.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

J Brian RobertsonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37240, USA.
Chris C Stowers
Erik Boczko
Carl Hirschie Johnson
Harvard University · USInstitute of Chemical Engineering · BGVanderbilt University · US

Funding

Circadian Programs in BacteriaR01GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2003 to 2014
$3.9M
NIGMS NIH HHS R01 GM067152PHS HHS NIGMS R01 067152
6 · The paper itself

Abstract

The use of luciferase reporters has become a precise, noninvasive, high-throughput method for real-time monitoring of promoter activity in living cells, especially for rhythmic biological processes such as circadian rhythms. We developed a destabilized firefly luciferase as a reporter for rhythmic promoter activity in both the cell division and respiratory cycles of the budding yeast Saccharomyces cerevisiae in which real-time luminescence reporters have not been previously applied. The continuous output of light from luciferase reporters allowed us to explore the relationship between the cell division cycle and the yeast respiratory oscillation, including the observation of responses to chemicals that cause phase shifting of the respiratory oscillations. Destabilized firefly luciferase is a good reporter of cell cycle position in synchronized or partially synchronized yeast cultures, in both batch and continuous cultures. In addition, the oxygen dependence of luciferase can be used under certain conditions as a genetically encodable oxygen monitor. Finally, we use this reporter to show that there is a direct correlation between premature induction of cell division and phase resetting of the respiratory oscillation under the continuous culture conditions tested.

Indexed as

Cell CycleAcetaldehydeAerobiosisEthanolGenes, ReporterLuciferasesLuminescent MeasurementsOxygenPromoter Regions, GeneticSaccharomyces cerevisiaeTime FactorsAcetaldehydeEthanolLuciferasesOxygen

Identifiers

PMID19004762
PMCPMC2584751
OpenAlexW2151375428

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.