Evidence map›Paper›PMID 19001877›Full record

ArticleCell cycle (Georgetown, Tex.)2008

KDM2A represses transcription of centromeric satellite repeats and maintains the heterochromatic state.

David Frescas, Daniele Guardavaccaro, Shafi M Kuchay, Hiroyuki Kato, Andrey Poleshko, Venkatesha Basrur, Kojo S Elenitoba-Johnson, Richard A Katz, Michele Pagano

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 138 citations in OpenAlex.

  1. Article
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  10. Alpha Satellite DNA in Targeted Drug Therapy for Prostate Cancer.International journal of molecular sciences · 2023
    Article
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  12. Article
  13. Article
  14. Review
  15. Article
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

David FrescasDepartment of Pathology, New York University Cancer Institute, New York University School of Medicine, New York, New York 10016, USA.
Daniele Guardavaccaro
Shafi M Kuchay
Hiroyuki Kato
Andrey Poleshko
Venkatesha Basrur
Kojo S Elenitoba-Johnson
Richard A Katz
Michele Pagano
New York University · US

Funding

REGULATION OF THE GI PHASE BY THE UBIQUITIN PATHWAYR01GM057587 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PAGANO, MICHELE · 1998 to 2018
$7.8M
F-box proteins: deregulated cell cycle control and proteolysis in cancerR37CA076584 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PAGANO, MICHELE · 2006 to 2016
$4.7M
Quantitative proteomic analysis of lymphoma transformationR33CA112061 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELENITOBA-JOHNSON, KOJO S. J. · 2006 to 2008
$857k
Howard Hughes Medical InstituteNCI NIH HHS R33-CA112061NCI NIH HHS R37 CA076584NCI NIH HHS R37-CA76584NIGMS NIH HHS R01 GM057587NIGMS NIH HHS R01-GM57587
6 · The paper itself

Abstract

Heterochromatin plays an essential role in the preservation of epigenetic information, the transcriptional repression of repetitive DNA elements and inactive genes, and the proper segregation of chromosomes during mitosis. Here we identify KDM2A, a JmjC-domain containing histone demethylase, as a heterochromatin-associated and HP1-interacting protein that promotes HP1 localization to chromatin. We show that KDM2A is required to maintain the heterochromatic state, as determined using a candidate-based approach coupled to an in vivo epigenetic reporter system. Remarkably, a parallel and independent siRNA screen also detected a role for KDM2A in epigenetic silencing. Moreover, we demonstrate that KDM2A associates with centromeres and represses transcription of small non-coding RNAs that are encoded by the clusters of satellite repeats at the centromere. Dissecting the relationship between heterochromatin and centromeric RNA transcription is the basis of ongoing studies. We demonstrate that forced expression of these satellite RNA transcripts compromise the heterochromatic state and HP1 localization to chromatin. Finally, we show that KDM2A is required to sustain centromeric integrity and genomic stability, particularly during mitosis. Since the disruption of epigenetic control mechanisms contributes to cellular transformation, these results, together with the low levels of KDM2A found in prostate carcinomas, suggest a role for KDM2A in cancer development.

Indexed as

Transcription, Genetic3T3 CellsAnimalsCell Transformation, NeoplasticCentromereChromatin Assembly and DisassemblyDNA, SatelliteF-Box ProteinsGenomic InstabilityHeLa CellsHeterochromatinHistonesHumansJumonji Domain-Containing Histone DemethylasesMiceOxidoreductases, N-DemethylatingDNA, SatelliteF-Box ProteinsHeterochromatinHistonesJumonji Domain-Containing Histone DemethylasesKDM2A protein, humanOxidoreductases, N-Demethylating

Identifiers

PMID19001877
PMCPMC2636745
OpenAlexW2149135513

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.