Evidence map›Paper›PMID 18998634›Full record

ArticleJournal of the American Chemical Society2008

Dynamic combinatorial selection of molecules capable of inhibiting the (CUG) repeat RNA-MBNL1 interaction in vitro: discovery of lead compounds targeting myotonic dystrophy (DM1).

Peter C Gareiss, Krzysztof Sobczak, Brian R McNaughton, Prakash B Palde, Charles A Thornton, Benjamin L Miller

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 187 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Fragment-Based Approaches to Identify RNA Binders.Journal of medicinal chemistry · 2023
    Review
  5. Article
  6. Review
  7. RNA-Binding Macrocyclic Peptides.Frontiers in molecular biosciences · 2022
    Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Target-Directed Approaches for Screening Small Molecules against RNA Targets.SLAS discovery : advancing life sciences R & D · 2020
    Review
  16. Article
  17. Article
  18. Article
  19. Beyond protein binding: recent advances in screening DNA-encoded libraries.Chemical communications (Cambridge, England) · 2019
    Review
  20. Mitigating RNA Toxicity in Myotonic Dystrophy using Small Molecules.International journal of molecular sciences · 2019
    Review

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Peter C GareissDepartment of Biochemistry and Biophysics, University of Rochester, Rochester, New York 14642, USA.
Krzysztof Sobczak
Brian R McNaughton
Prakash B Palde
Charles A Thornton
Benjamin L Miller
University of Rochester · US

Funding

Training and Educational CoreU54NS048843 · NINDS · UNIVERSITY OF ROCHESTER · PI DIRKSEN, ROBERT T · 2003 to 2017
$21.9M
TRAINING PROGRAM IN DERMATOLOGICAL RESEARCHT32AR007472 · NIAMS · UNIVERSITY OF ROCHESTER · PI PENTLAND, ALICE P · 1987 to 2013
$2.1M
Integrative Pathophysiology of Myotonic DystrophyK24AR048143 · NIAMS · UNIVERSITY OF ROCHESTER · PI THORNTON, CHARLES A · 2002 to 2012
$1.1M
Therapeutic approach targeting RNA disease in myotonic dystrophyR21NS058345 · NINDS · UNIVERSITY OF ROCHESTER · PI THORNTON, CHARLES A · 2007 to 2008
$364k
NIAMS NIH HHS K24 AR048143NIAMS NIH HHS T32 AR007472NIAMS NIH HHS T32AR007472NINDS NIH HHS 08U54NS048843-05NINDS NIH HHS NS58345NINDS NIH HHS R21 NS058345NINDS NIH HHS U54 NS048843
6 · The paper itself

Abstract

Myotonic dystrophy type 1 (DM1), the most common form of muscular dystrophy in adults, is an RNA-mediated disease. Dramatically expanded (CUG) repeats accumulate in nuclei and sequester RNA-binding proteins such as the splicing regulator MBNL1. We have employed resin-bound dynamic combinatorial chemistry (RBDCC) to identify the first examples of compounds able to inhibit MBNL1 binding to (CUG) repeat RNA. Screening an RBDCL with a theoretical diversity of 11 325 members yielded several molecules with significant selectivity for binding to (CUG) repeat RNA over other sequences. These compounds were also able to inhibit the interaction of GGG-(CUG)(109)-GGG RNA with MBNL1 in vitro, with K(i) values in the low micromolar range.

Indexed as

Tandem Repeat SequencesCombinatorial Chemistry TechniquesDimerizationLeadLigandsMyotonic DystrophyRNARNA-Binding ProteinsLeadLigandsRNARNA-Binding Proteins

Identifiers

PMID18998634
PMCPMC2645920
OpenAlexW2014599804

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.