Evidence map›Paper›PMID 18995835›Full record

ArticleMolecular cell2008

DAPK-ZIPK-L13a axis constitutes a negative-feedback module regulating inflammatory gene expression.

Rupak Mukhopadhyay, Partho Sarothi Ray, Abul Arif, Anna K Brady, Michael Kinter, Paul L Fox

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 143 citations in OpenAlex.

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  10. Antigen-specific age-related memory CD8 T cells induce and track Alzheimer's-like neurodegeneration.Proceedings of the National Academy of Sciences of the United States of America · 2024
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33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rupak MukhopadhyayDepartment of Cell Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA.
Partho Sarothi Ray
Abul Arif
Anna K Brady
Michael Kinter
Paul L Fox
Cleveland Clinic Lerner College of Medicine · US

Funding

Vascular Cell function and AtherosclerosisP01HL029582 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI LI, XIAOXIA · 1985 to 2019
$32.0M
Structural Determinants Of Ceruloplasmin Inflammatory ActivityP01HL076491 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI GOGONEA, VALENTIN · 2004 to 2019
$27.3M
ROLE OF CERULOPLASMIN IN IRON METABOLISM AND OVERLOADR01HL067725 · NHLBI · CLEVELAND CLINIC LERNER COL/MED-CWRU · PI FOX, PAUL L · 2000 to 2003
$1.1M
NHLBI NIH HHS HL29582NHLBI NIH HHS HL67725NHLBI NIH HHS HL76491NHLBI NIH HHS P01 HL029582NHLBI NIH HHS P01 HL076491NHLBI NIH HHS R01 HL067725
6 · The paper itself

Abstract

Phosphorylation of ribosomal protein L13a is essential for translational repression of inflammatory genes by the interferon (IFN)-gamma-activated inhibitor of translation (GAIT) complex. Here we show that IFN-gamma activates a kinase cascade in which death-associated protein kinase-1 (DAPK) activates zipper-interacting protein kinase (ZIPK), culminating in L13a phosphorylation on Ser(77), L13a release from the ribosome, and translational silencing of GAIT element-bearing target mRNAs. Remarkably, both kinase mRNAs contain functional 3'UTR GAIT elements, and thus the same inhibitory pathway activated by the kinases is co-opted to suppress their expression. Inhibition of DAPK and ZIPK facilitates cell restoration to the basal state and allows renewed induction of GAIT target transcripts by repeated stimulation. Thus, the DAPK-ZIPK-L13a axis forms a unique regulatory module that first represses, then repermits inflammatory gene expression. We propose that the module presents an important checkpoint in the macrophage "resolution of inflammation" program, and that pathway defects may contribute to chronic inflammatory disorders.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCalcium-Calmodulin-Dependent Protein KinasesGene Expression RegulationHumansInflammationMAP Kinase Kinase KinasesPeptide FragmentsPhosphorylationPlasmidsRibosomal ProteinsRibosomesRNA, MessengerSequence AlignmentSequence Homology, Amino AcidCalcium-Calmodulin-Dependent Protein KinasesMAP Kinase Kinase Kinasesmitogen-activated protein kinase kinase kinase 12Peptide FragmentsRibosomal ProteinsRNA, Messenger

Identifiers

PMID18995835
PMCPMC2644327
OpenAlexW2033784438

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.