Evidence map›Paper›PMID 18990184›Full record

ArticleMolecular microbiology2008

The diverse CheC-type phosphatases: chemotaxis and beyond.

Travis J Muff, George W Ordal

Abstract read
In one paragraph

Article in Molecular microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Chemotaxis Towards Aromatic Compounds: Insights fromInternational journal of molecular sciences · 2019
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Identical phosphatase mechanisms achieved through distinct modes of binding phosphoprotein substrate.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Travis J MuffDepartment of Biochemistry, Colleges of Medicine and Liberal Arts and Sciences, University of Illinois, Urbana, IL 61801, USA. tjmuff@scripps.edu
George W Ordal

Funding

CHEMOTACTIC SENSORY TRANSDUCTION IN BACILLUS SUBTILISR01GM054365 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI ORDAL, GEORGE W. · 1996 to 2012
$4.3M
NIGMS NIH HHS R01 GM054365NIGMS NIH HHS R01GM54365
6 · The paper itself

Abstract

A new class of protein phosphatases has emerged in the study of bacterial/archaeal chemotaxis, the CheC-type phosphatases. These proteins are distinct and unrelated to the well-known CheY-P phosphatase CheZ, though they have convergently evolved to dephosphorylate the same target. The family contains a common consensus sequence D/S-X(3)-E-X(2)-N-X(22)-P that defines the phosphatase active site, of which there are often two per protein. Three distinct subgroups make up the family: CheC, FliY and CheX. Further, the CheC subgroup can be divided into three classes. Bacillus subtilis CheC typifies the first class and might function as a regulator of CheD. Class II CheCs likely function as phosphatases in systems other than chemotaxis. Class III CheCs are found in the archaeal class Halobacteria and might function as class I CheCs. FliY is the main phosphatase in the B. subtilis chemotaxis system. CheX is quite divergent from the rest of the family, forms a dimer and some may function outside chemotaxis. A model for the evolution of the family is discussed.

Indexed as

Bacillus subtilisBacterial ProteinsChemotaxisEvolution, MolecularMembrane ProteinsModels, MolecularPhosphoprotein PhosphatasesPhylogenyProtein Structure, TertiarySignal TransductionBacterial ProteinsCheC protein, Bacillus subtilisFliY protein, BacteriaMembrane ProteinsPhosphoprotein Phosphatases

Identifiers

PMID18990184
PMCPMC2698994

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.