Evidence map›Paper›PMID 18989016›Full record

ArticleIEEE transactions on visualization and computer graphics

Effective visualization of complex vascular structures using a non-parametric vessel detection method.

Alark Joshi, Xiaoning Qian, Donald P Dione, Ketan R Bulsara, Christopher K Breuer, Albert J Sinusas, Xenophon Papademetris

Abstract read
In one paragraph

Article in IEEE transactions on visualization and computer graphics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Scale-adaptive surface modeling of vascular structures.Biomedical engineering online · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alark JoshiDepartment of Diagnostic Radiology, Yale School of Medicine. alark.joshi@yale.edu
Xiaoning Qian
Donald P Dione
Ketan R Bulsara
Christopher K Breuer
Albert J Sinusas
Xenophon Papademetris

Funding

Non-Invasive Methods for Imaging Myocardial AngiogenesisR01HL065662 · NHLBI · YALE UNIVERSITY · PI SINUSAS, ALBERT J · 2001 to 2009
$3.2M
Bioimage Suite: A structural, functional and metabolic image analysis platformR01EB006494 · NIBIB · YALE UNIVERSITY · PI PAPADEMETRIS, XENOPHON · 2006 to 2009
$1.5M
Development of Second Generation Tissue Engineered Vascular GraftsK08HL083980 · NHLBI · YALE UNIVERSITY · PI BREUER, CHRISTOPHER KANE · 2006 to 2010
$666k
NHLBI NIH HHS K08 HL083980NHLBI NIH HHS R01 HL065662NHLBI NIH HHS R01HL065662NIBIB NIH HHS R01 EB006494NIBIB NIH HHS R01EB006494
6 · The paper itself

Abstract

The effective visualization of vascular structures is critical for diagnosis, surgical planning as well as treatment evaluation. In recent work, we have developed an algorithm for vessel detection that examines the intensity profile around each voxel in an angiographic image and determines the likelihood that any given voxel belongs to a vessel; we term this the "vesselness coefficient" of the voxel. Our results show that our algorithm works particularly well for visualizing branch points in vessels. Compared to standard Hessian based techniques, which are fine-tuned to identify long cylindrical structures, our technique identifies branches and connections with other vessels. Using our computed vesselness coefficient, we explore a set of techniques for visualizing vasculature. Visualizing vessels is particularly challenging because not only is their position in space important for clinicians but it is also important to be able to resolve their spatial relationship. We applied visualization techniques that provide shape cues as well as depth cues to allow the viewer to differentiate between vessels that are closer from those that are farther. We use our computed vesselness coefficient to effectively visualize vasculature in both clinical neurovascular x-ray computed tomography based angiography images, as well as images from three different animal studies. We conducted a formal user evaluation of our visualization techniques with the help of radiologists, surgeons, and other expert users. Results indicate that experts preferred distance color blending and tone shading for conveying depth over standard visualization techniques.

Indexed as

AlgorithmsArtificial IntelligenceAngiographyImage EnhancementImage Interpretation, Computer-AssistedImaging, Three-DimensionalPattern Recognition, AutomatedReproducibility of ResultsSensitivity and Specificity

Identifiers

PMID18989016
PMCPMC2636705

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.