Evidence map›Paper›PMID 18988731›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating.

Rachna Ujwal, Duilio Cascio, Jacques-Philippe Colletier, Salem Faham, Jun Zhang, Ligia Toro, Peipei Ping, Jeff Abramson

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 298 papers.

0numbers the graph read from it
0cells of the map it votes in
298citing papers in PubMed
15.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

298 citing papers in PubMed, 533 citations in OpenAlex.

  1. Article
  2. Review
  3. Elliptical β-barrel deformation underlies gating in VDAC1.Protein science : a publication of the Protein Society · 2026
    Article
  4. Review
  5. Review
  6. Article
  7. Membrane protein structure and dynamics probed by MicroED.Biochemical Society transactions · 2026
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
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  20. Article

238 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Rachna UjwalDepartment of Physiology, Cardiovascular Research Laboratories, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.
Duilio Cascio
Jacques-Philippe Colletier
Salem Faham
Jun Zhang
Ligia Toro
Peipei Ping
Jeff Abramson
Czech Academy of Sciences, Institute of Physiology · CZUniversity of California, Los Angeles · US

Funding

Structures of sodium glucose transporters by cryo electron microscopyR01GM078844 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABRAMSON, JEFFREY S · 2006 to 2018
$5.3M
ACE Inhibition and Novel Cardiovascular Risk FactorsR01HL068901 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI PAHOR, MARCO · 2002 to 2004
$2.0M
Role of mitochondria in cardiac protectionR01HL080691 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PING, PEIPEI · 2006 to 2010
$1.9M
NHLBI NIH HHS HL-080691NHLBI NIH HHS HL-68901NHLBI NIH HHS R01 HL068901NHLBI NIH HHS R01 HL080691NIGMS NIH HHS GM07844NIGMS NIH HHS R01 GM078844PHS HHS P01-080111
6 · The paper itself

Abstract

The voltage-dependent anion channel (VDAC) constitutes the major pathway for the entry and exit of metabolites across the outer membrane of the mitochondria and can serve as a scaffold for molecules that modulate the organelle. We report the crystal structure of a beta-barrel eukaryotic membrane protein, the murine VDAC1 (mVDAC1) at 2.3 A resolution, revealing a high-resolution image of its architecture formed by 19 beta-strands. Unlike the recent NMR structure of human VDAC1, the position of the voltage-sensing N-terminal segment is clearly resolved. The alpha-helix of the N-terminal segment is oriented against the interior wall, causing a partial narrowing at the center of the pore. This segment is ideally positioned to regulate the conductance of ions and metabolites passing through the VDAC pore.

Indexed as

Ion Channel GatingAnimalsCrystallography, X-RayMiceModels, MolecularPorosityProtein Structure, SecondaryProtein Structure, TertiarySolubilityStatic ElectricityVoltage-Dependent Anion Channel 1Vdac1 protein, mouseVoltage-Dependent Anion Channel 1

Identifiers

PMID18988731
PMCPMC2584669
OpenAlexW2129141040

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.