Evidence map›Paper›PMID 18988621›Full record

ArticleJournal of experimental botany2009

Cold-induced modulation and functional analyses of the DRE-binding transcription factor gene, GmDREB3, in soybean (Glycine max L.).

Ming Chen, Zhaoshi Xu, Lanqin Xia, Liancheng Li, Xianguo Cheng, Jianhui Dong, Qiaoyan Wang, Youzhi Ma

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
10.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 190 citations in OpenAlex.

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  10. Twenty years of mining salt tolerance genes in soybean.Molecular breeding : new strategies in plant improvement · 2023
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  13. Life (Basel, Switzerland) · 2022
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  14. SugarcaneInternational journal of molecular sciences · 2022
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  17. Genome-Wide Analysis ofFrontiers in plant science · 2022
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  18. The DREB A-5 Transcription Factor ScDREB5 FromFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Ming ChenNational Key Facility for Crop Gene Resources and Genetic Improvement (NKFCRI)/Key Laboratory of Crop Genetics and Breeding, Ministry of Agriculture, Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS), Beijing, PR China.
Zhaoshi Xu
Lanqin Xia
Liancheng Li
Xianguo Cheng
Jianhui Dong
Qiaoyan Wang
Youzhi Ma
Chinese Academy of Agricultural Sciences · CNInstitute of Crop Sciences · CNInstitute of Agricultural Resources and Regional Planning · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DREB (dehydration-responsive element-binding protein) transcription factors have important roles in the stress-related regulation network in plants. A DREB orthologue, GmDREB3, belonging to the A-5 subgroup of the DREB subfamily, was isolated from soybean using the RACE (rapid amplification of cDNA ends) method. Northern blot analysis showed that expression of GmDREB3 in soybean seedlings was induced following cold stress treatment for 0.5 h and was not detected after 3 h. However, it was not induced by drought and high salt stresses or by abscisic acid (ABA) treatment. This response was similar to those of members in the A-1 subgroup and different from those of other members in the A-5 subgroup, suggesting that the GmDREB3 gene was involved in an ABA-independent cold stress-responsive signal pathway. Furthermore, analysis of the GmDREB3 promoter elucidated its cold-induced modulation. A promoter fragment containing bases -1058 to -664 was involved in response to cold stress, and its effect was detected for 1 h after treatment, but a transcriptional repressor appeared to impair this response by binding to a cis-element in the region -1403 to -1058 at 24 h after the beginning of cold stress. Moreover, the GmDREB3 protein could specifically bind to the DRE element in vitro, and activated expression of downstream reporter genes in yeast cells. In addition, overexpression of GmDREB3 enhanced tolerance to cold, drought, and high salt stresses in transgenic Arabidopsis. Physiological analyses indicated that the fresh weight and osmolality of GmDREB3 transgenic Arabidopsis under cold stress were higher than those of wild-type controls. GmDREB3 transgenic tobacco accumulated higher levels of free proline under drought stress and retained higher leaf chlorophyll levels under high salt stress than wild-type tobacco. In addition, constitutive expression of GmDREB3 in transgenic Arabidopsis caused growth retardation, whereas its expression under control of the stress-inducible Rd29A promoter minimized negative effects on plant growth under normal growth conditions, indicating that a combination of the Rd29A promoter and GmDREB3 might be useful for improving tolerance to environmental stresses in crop plants.

Indexed as

Gene Expression Regulation, PlantTranscriptional ActivationArabidopsisBase SequenceBinding SitesCold TemperatureGlycine maxMolecular Sequence DataNicotianaPlant ProteinsPromoter Regions, GeneticProtein BindingTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID18988621
PMCPMC3071762
OpenAlexW2101737033

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.