Evidence map›Paper›PMID 18987637›Full record

ArticleThe EMBO journal2008

Structural determinants of Kvbeta1.3-induced channel inactivation: a hairpin modulated by PIP2.

Niels Decher, Teresa Gonzalez, Anne Kathrin Streit, Frank B Sachse, Vijay Renigunta, Malle Soom, Stefan H Heinemann, Jürgen Daut, Michael C Sanguinetti

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. PIPProceedings of the National Academy of Sciences of the United States of America · 2020
    Review
  5. KChannels (Austin, Tex.) · 2018
    Article
  6. Transmural gradients in ion channel and auxiliary subunit expression.Progress in biophysics and molecular biology · 2016
    Review
  7. Article
  8. Article
  9. Article
  10. Phosphoinositides regulate ion channels.Biochimica et biophysica acta · 2015
    Review
  11. Article
  12. Review
  13. Dynamic PIP2 interactions with voltage sensor elements contribute to KCNQ2 channel gating.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  14. Article
  15. Article
  16. Regulation of voltage-gated potassium channels by PI(4,5)P2.The Journal of general physiology · 2012
    Article
  17. Article
  18. Article
  19. Article
  20. Oxidation of NADPH on Kvbeta1 inhibits ball-and-chain type inactivation by restraining the chain.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Niels DecherNora Eccles Harrison Cardiovascular Research and Training Institute, University of Utah, Salt Lake City, UT, USA. decher@staff.uni-marburg.de
Teresa Gonzalez
Anne Kathrin Streit
Frank B Sachse
Vijay Renigunta
Malle Soom
Stefan H Heinemann
Jürgen Daut
Michael C Sanguinetti
Philipps University of Marburg · DEUniversity of Utah · USFriedrich Schiller University Jena · DEUniversidad Autónoma de Madrid · ES

Funding

MOLECULAR MECHANISMS OF PACEMAKER CHANNEL FUNCTIONR01HL065299 · NHLBI · UNIVERSITY OF UTAH · PI SANGUINETTI, MICHAEL CRAIG · 2000 to 2008
$2.5M
NHLBI NIH HHS R01 HL065299
6 · The paper itself

Abstract

Inactivation of voltage-gated Kv1 channels can be altered by Kvbeta subunits, which block the ion-conducting pore to induce a rapid ('N-type') inactivation. Here, we investigate the mechanisms and structural basis of Kvbeta1.3 interaction with the pore domain of Kv1.5 channels. Inactivation induced by Kvbeta1.3 was antagonized by intracellular PIP(2). Mutations of R5 or T6 in Kvbeta1.3 enhanced Kv1.5 inactivation and markedly reduced the effects of PIP(2). R5C or T6C Kvbeta1.3 also exhibited diminished binding of PIP(2) compared with wild-type channels in an in vitro lipid-binding assay. Further, scanning mutagenesis of the N terminus of Kvbeta1.3 revealed that mutations of L2 and A3 eliminated N-type inactivation. Double-mutant cycle analysis indicates that R5 interacts with A501 and T480 of Kv1.5, residues located deep within the pore of the channel. These interactions indicate that Kvbeta1.3, in contrast to Kvbeta1.1, assumes a hairpin structure to inactivate Kv1 channels. Taken together, our findings indicate that inactivation of Kv1.5 is mediated by an equilibrium binding of the N terminus of Kvbeta1.3 between phosphoinositides (PIPs) and the inner pore region of the channel.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionKv1.3 Potassium ChannelKv1.5 Potassium ChannelModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedMutant ProteinsMutation, MissensePhosphatidylinositol 4,5-DiphosphateProtein BindingProtein Interaction MappingProtein Structure, QuaternaryKCNAB1 protein, humanKv1.3 Potassium ChannelKv1.5 Potassium ChannelMutant ProteinsPhosphatidylinositol 4,5-Diphosphate

Identifiers

PMID18987637
PMCPMC2599874
OpenAlexW2119149531

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.