Evidence map›Paper›PMID 18986647›Full record

ArticleBiological psychiatry2009

An E3 ubiquitin ligase, Really Interesting New Gene (RING) Finger 41, is a candidate gene for anxiety-like behavior and beta-carboline-induced seizures.

Sanghyeon Kim, Shumin Zhang, Kwang H Choi, Robin Reister, Chi Do, Ali F Baykiz, Howard K Gershenfeld

Open access · greenAbstract read
In one paragraph

Article in Biological psychiatry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sanghyeon KimDepartment of Psychiatry, University of Texas Southwestern Medical Center, Dallas, Texas, USA.
Shumin Zhang
Kwang H Choi
Robin Reister
Chi Do
Ali F Baykiz
Howard K Gershenfeld
The University of Texas Southwestern Medical Center · USStanley Medical Research Institute · US

Funding

Neurogenetics of Stress VulnerabilityR01MH067211 · NIMH · UT SOUTHWESTERN MEDICAL CENTER · PI GERSHENFELD, HOWARD K · 2003 to 2007
$1.6M
POSITIONAL CLONING OF A PLEIOTROPIC LOCUS FOR BEHAVIORR01MH058882 · NIMH · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI GERSHENFELD, HOWARD K · 1998 to 2002
$688k
NIMH NIH HHS R01 MH058882NIMH NIH HHS R01 MH067211
6 · The paper itself

Abstract

backgroundIdentification of the genes underlying psychiatric illness remains a thorny problem. Previously, Quantitative Trait Loci (QTL) for anxiety-like behaviors and beta-carboline-induced seizure vulnerability have been mapped to the distal portion of mouse chromosome 10, with crosses of A/J and C57BL6 mice.

methodsAn interval specific congenic strain for this chromosomal 10 region facilitated the genetic dissection of novelty-induced exploratory behaviors.

resultsBy microarray studies, an unsuspected E3 ubiquitin ligase, Really Interesting New Gene (RING) Finger 41 (Rnf41) was differentially expressed in the region of interest, being upregulated in the hippocampi of B6 compared with A/J as well as congenic A.B6(chr10) versus A/J. By quantitative real-time polymerase chain reaction (qRT-PCR), Rnf41 expression levels were significantly increased 1.5- and 1.3-fold in the hippocampi of C57BL6/J and A.B6(chr10) mice compared with A/J mice, respectively. Protein levels of Rnf41 were increased in hippocampi of B6 mice compared with A/J mice across postnatal development with a 5.5-fold difference at P56. Yeast two-hybrid studies searching for Rnf41 binding partners in fetal hippocampus identified several potential targets. An interaction between Rnf41 and NogoA was validated by glutathionine-S-transferase-Rnf41 pulldown experiments. Re-analysis of a microarray database of human postmortem prefrontal cortex (Brodmann's Area 46/10) found that RNF41 messenger RNA expression levels were reduced significantly in patients with major depression and bipolar disorder compared with unaffected control subjects and confirmed by qRT-PCR.

conclusionsOverall, Rnf41 is nominated as a candidate gene for anxiety-like behaviors, depression, and vulnerability to seizures. The RNF41 and its binding partners suggest molecular pathways underlying behavior, highlighting a potential role for the ubiquitin proteasome system in psychiatric illness.

Indexed as

Exploratory BehaviorAnimalsAnxietyBiomarkersBipolar DisorderCarbolinesCarrier ProteinsHippocampusHumansMajor Depressive DisorderMaleMiceMice, Inbred StrainsPrefrontal CortexRNA, MessengerSeizuresBiomarkersCarbolinesCarrier ProteinsRNA, MessengerRnf41 protein, mouseUbiquitin-Protein Ligases

Identifiers

PMID18986647
PMCPMC2667267
OpenAlexW2036750997

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.