Evidence map›Paper›PMID 18981233›Full record

ArticleThe Journal of cell biology2008

Coordinated regulation of AP2 uncoating from clathrin-coated vesicles by rab5 and hRME-6.

Sophia Semerdjieva, Barry Shortt, Emma Maxwell, Sukhdeep Singh, Paul Fonarev, Jonathan Hansen, Giampietro Schiavo, Barth D Grant, Elizabeth Smythe

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
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  7. Review
  8. Phosphoinositides as membrane organizers.Nature reviews. Molecular cell biology · 2022
    Review
  9. Review
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  11. Transforming growth factor-β in tumour development.Frontiers in molecular biosciences · 2022
    Review
  12. Review
  13. Article
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  15. Revising Endosomal Trafficking under Insulin Receptor Activation.International journal of molecular sciences · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sophia SemerdjievaDepartment of Biomedical Science, University of Sheffield, Sheffield S10 2TN, England, UK.
Barry Shortt
Emma Maxwell
Sukhdeep Singh
Paul Fonarev
Jonathan Hansen
Giampietro Schiavo
Barth D Grant
Elizabeth Smythe
University of Sheffield · GBRutgers, The State University of New Jersey · USCancer Research UK · GB

Funding

Membrane Traffic in C. elegans and MammalsR01GM067237 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI GRANT, BARTH DEMIAN · 2003 to 2019
$6.1M
Biotechnology and Biological Sciences Research Council BBS/B/04072British Heart Foundation FS/2001053Medical Research Council G0300452NIGMS NIH HHS GM67237NIGMS NIH HHS R01 GM067237Wellcome TrustWellcome Trust GR077544AIA
6 · The paper itself

Abstract

Here we investigate the role of rab5 and its cognate exchange factors rabex-5 and hRME-6 in the regulation of AP2 uncoating from endocytic clathrin-coated vesicles (CCVs). In vitro, we show that the rate of AP2 uncoating from CCVs is dependent on the level of functional rab5. In vivo, overexpression of dominant-negative rab5(S34N), or small interfering RNA (siRNA)-mediated depletion of hRME-6, but not rabex-5, resulted in increased steady-state levels of AP2 associated with endocytic vesicles, which is consistent with reduced uncoating efficiency. hRME-6 guanine nucleotide exchange factor activity requires hRME-6 binding to alpha-adaptin ear, which displaces the ear-associated mu2 kinase AAK1. siRNA-mediated depletion of hRME-6 increases phospho-mu2 levels, and expression of a phosphomimetic mu2 mutant increases levels of endocytic vesicle-associated AP2. Depletion of hRME-6 or rab5(S35N) expression also increases the levels of phosphoinositide 4,5-bisphosphate (PtdIns(4,5)P(2)) associated with endocytic vesicles. These data are consistent with a model in which hRME-6 and rab5 regulate AP2 uncoating in vivo by coordinately regulating mu2 dephosphorylation and PtdIns(4,5)P(2) levels in CCVs.

Indexed as

Adaptor Protein Complex 2AnimalsCell LineCell MembraneClathrin-Coated VesiclesCytosolEndocytosisHumansKidneyMembrane ProteinsMiceMice, KnockoutNerve Tissue ProteinsNeuronsPhosphoric Monoester Hydrolasesrab5 GTP-Binding ProteinsAdaptor Protein Complex 2Membrane ProteinsNerve Tissue ProteinsPhosphoric Monoester Hydrolasesrab5 GTP-Binding Proteinssynaptojanin

Identifiers

PMID18981233
PMCPMC2575790
OpenAlexW2118118457

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.