Evidence map›Paper›PMID 18981232›Full record

ArticleThe Journal of cell biology2008

The outer segment serves as a default destination for the trafficking of membrane proteins in photoreceptors.

Sheila A Baker, Mohammad Haeri, Peter Yoo, Sidney M Gospe, Nikolai P Skiba, Barry E Knox, Vadim Y Arshavsky

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Frontiers in molecular neuroscience · 2023
    Article
  9. Functional compartmentalization of photoreceptor neurons.Pflugers Archiv : European journal of physiology · 2021
    Review
  10. Article
  11. Deletion ofInternational journal of ophthalmology · 2021
    Article
  12. Compartmentalization of Photoreceptor Sensory Cilia.Frontiers in cell and developmental biology · 2021
    Review
  13. Article
  14. Syntaxin 3 is essential for photoreceptor outer segment protein trafficking and survival.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Article
  17. Review
  18. Transport of Ciliary Membrane Proteins.Frontiers in cell and developmental biology · 2019
    Review
  19. Mechanisms of ciliary targeting: entering importins and Rabs.Cellular and molecular life sciences : CMLS · 2018
    Review
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Sheila A BakerAlbert Eye Research Institute, Duke University Medical Center, Durham, NC 27710, USA.
Mohammad Haeri
Peter Yoo
Sidney M Gospe
Nikolai P Skiba
Barry E Knox
Vadim Y Arshavsky
Duke Medical Center · USDuke University Hospital · USSUNY Upstate Medical University · USSmith-Kettlewell Eye Research Institute · US

Funding

VISION RESEARCHP30EY005722 · NEI · DUKE UNIVERSITY · PI Vadim Y Arshavsky · 1985 to 2026
$19.3M
Molecular mechanisms of photoreceptor outer segment morphogenesisR01EY012859 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI ARSHAVSKY, VADIM Y · 2000 to 2022
$10.0M
Transducin movement and photoreceptor light adaptationR01EY010336 · NEI · UNIVERSITY OF WISCONSIN MADISON · PI ARSHAVSKY, VADIM Y · 1994 to 2012
$6.3M
MOLECULAR MECHANISMS OF PHOTORECEPTOR FUNCTIONR01EY012975 · NEI · UPSTATE MEDICAL UNIVERSITY · PI KNOX, BARRY E · 2000 to 2010
$2.3M
NEI NIH HHS EY12859NEI NIH HHS EY12975NEI NIH HHS EY5722NEI NIH HHS P30 EY005722NEI NIH HHS R01 EY010336NEI NIH HHS R01 EY012859NEI NIH HHS R01 EY012975
6 · The paper itself

Abstract

Photoreceptors are compartmentalized neurons in which all proteins responsible for evoking visual signals are confined to the outer segment. Yet, the mechanisms responsible for establishing and maintaining photoreceptor compartmentalization are poorly understood. Here we investigated the targeting of two related membrane proteins, R9AP and syntaxin 3, one residing within and the other excluded from the outer segment. Surprisingly, we have found that only syntaxin 3 has targeting information encoded in its sequence and its removal redirects this protein to the outer segment. Furthermore, proteins residing in the endoplasmic reticulum and mitochondria were similarly redirected to the outer segment after removing their targeting signals. This reveals a pattern where membrane proteins lacking specific targeting information are delivered to the outer segment, which is likely to reflect the enormous appetite of this organelle for new material necessitated by its constant renewal. This also implies that every protein residing outside the outer segment must have a means to avoid this "default" trafficking flow.

Indexed as

AnimalsAnimals, Genetically ModifiedEndoplasmic ReticulumMembrane ProteinsMitochondriaNerve Tissue ProteinsNeuronsPhotoreceptor CellsProtein IsoformsProtein TransportQa-SNARE ProteinsRanidaeSignal TransductionSynapsesVision, OcularXenopus laevisMembrane ProteinsNerve Tissue ProteinsProtein IsoformsQa-SNARE ProteinsXenopus Proteins

Identifiers

PMID18981232
PMCPMC2575789
OpenAlexW2162811183

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.