Evidence map›Paper›PMID 18976468›Full record

ArticleBMC evolutionary biology2008

Gypsy endogenous retrovirus maintains potential infectivity in several species of Drosophilids.

Jose V Llorens, Jonathan B Clark, Isabel Martínez-Garay, Sirena Soriano, Rosa de Frutos, María J Martínez-Sebastián

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

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  4. CoelacanthJournal of virology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Jose V LlorensDepartament de Genètica, Universitat de València, 46100-Burjassot, Valencia, Spain. jovillo@uv.es
Jonathan B Clark
Isabel Martínez-Garay
Sirena Soriano
Rosa de Frutos
María J Martínez-Sebastián
Universitat de València · ESWeber State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSequences homologous to the gypsy retroelement from Drosophila melanogaster are widely distributed among drosophilids. The structure of gypsy includes an open reading frame resembling the retroviral gene env, which is responsible for the infectious properties of retroviruses.

resultsIn this study we report molecular and phylogeny analysis of the complete env gene from ten species of the obscura group of the genus Drosophila and one species from the genus Scaptomyza.

conclusionThe results indicate that in most cases env sequences could produce a functional Env protein and therefore maintain the infectious capability of gypsy in these species.

Indexed as

Evolution, MolecularGenes, envRetroelementsAnimalsCloning, MolecularDNADrosophilidaeEndogenous RetrovirusesGenes, InsectGenome, InsectLikelihood FunctionsModels, GeneticOpen Reading FramesPhylogenyProtein BiosynthesisReverse Transcriptase Polymerase Chain ReactionDNARetroelementsRNA, MessengerViral Envelope Proteins

Identifiers

PMID18976468
PMCPMC2585583
OpenAlexW2131605422

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.