ArticleJournal of microbiology (Seoul, Korea)2008
Turkey fecal microbial community structure and functional gene diversity revealed by 16S rRNA gene and metagenomic sequences.
Article in Journal of microbiology (Seoul, Korea), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 46 citations in OpenAlex.
- Informal nutrition symposium: leveraging the microbiome (and the metabolome) for poultry production.Poultry science · 2022Article
- The avian gut microbiota: Diversity, influencing factors, and future directions.Frontiers in microbiology · 2022Review
- The Composition of Gut Microbiota Community Structure of Jankowski's Bunting (Emberiza jankowskii).Current microbiology · 2020Article
- Impact of short-term application of seaweed fertilizer on bacterial diversity and community structure, soil nitrogen contents, and plant growth in maize rhizosphere soil.Folia microbiologica · 2020Article
- Comparative Analyses of the Digestive Tract Microbiota of New Guinean Passerine Birds.Frontiers in microbiology · 2018Article
- The gut microbiome of hooded cranes (Grus monacha) wintering at Shengjin Lake, China.MicrobiologyOpen · 2017Article
- Divergent selection-induced obesity alters the composition and functional pathways of chicken gut microbiota.Genetics, selection, evolution : GSE · 2016Article
- Genome and metagenome analyses reveal adaptive evolution of the host and interaction with the gut microbiota in the goose.Scientific reports · 2016Article
- High-throughput sequencing reveals the core gut microbiome of Bar-headed goose (Anser indicus) in different wintering areas in Tibet.MicrobiologyOpen · 2016Article
- Exploring the avian gut microbiota: current trends and future directions.Frontiers in microbiology · 2015Review
- Characterizing the avian gut microbiota: membership, driving influences, and potential function.Frontiers in microbiology · 2014Article
- The alligator gut microbiome and implications for archosaur symbioses.Scientific reports · 2013Article
- Performance of two quantitative PCR methods for microbial source tracking of human sewage and implications for microbial risk assessment in recreational waters.Applied and environmental microbiology · 2012Article
- Effect of dietary prebiotic (mannan oligosaccharide) supplementation on the caecal bacterial community structure of turkeys.Microbial ecology · 2012Article
- Comparison of gull feces-specific assays targeting the 16S rRNA genes of Catellicoccus marimammalium and Streptococcus spp.Applied and environmental microbiology · 2012Article
- Gut microbiome of the critically endangered New Zealand parrot, the kakapo (Strigops habroptilus).PloS one · 2012Article
- Effect of dietary supplementation with a Saccharomyces cerevisiae mannan oligosaccharide on the bacterial community structure of broiler cecal contents.Applied and environmental microbiology · 2011Article
- Identification and characterization of potential performance-related gut microbiotas in broiler chickens across various feeding trials.Applied and environmental microbiology · 2011Article
- Impacts of poultry house environment on poultry litter bacterial community composition.PloS one · 2011Article
- Evaluation of Lactobacillus sobrius/L. amylovorus as a new microbial marker of pig manure.Applied and environmental microbiology · 2010Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The primary goal of this study was to better understand the microbial composition and functional genetic diversity associated with turkey fecal communities. To achieve this, 16S rRNA gene and metagenomic clone libraries were sequenced from turkey fecal samples. The analysis of 382 16S rRNA gene sequences showed that the most abundant bacteria were closely related to Lactobacillales (47%), Bacillales (31%), and Clostridiales (11%). Actinomycetales, Enterobacteriales, and Bacteroidales sequences were also identified, but represented a smaller part of the community. The analysis of 379 metagenomic sequences showed that most clones were similar to bacterial protein sequences (58%). Bacteriophage (10%) and avian viruses (3%) sequences were also represented. Of all metagenomic clones potentially encoding for bacterial proteins, most were similar to low G+C Gram-positive bacterial proteins, particularly from Lactobacillales (50%), Bacillales (11%), and Clostridiales (8%). Bioinformatic analyses suggested the presence of genes encoding for membrane proteins, lipoproteins, hydrolases, and functional genes associated with the metabolism of nitrogen and sulfur containing compounds. The results from this study further confirmed the predominance of Firmicutes in the avian gut and highlight the value of coupling 16S rRNA gene and metagenomic sequencing data analysis to study the microbial composition of avian fecal microbial communities.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.