ArticleFrontiers in neuroinformatics2008
BAMS Neuroanatomical Ontology: Design and Implementation.
Article in Frontiers in neuroinformatics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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Who cites it
31 citing papers in PubMed.
- Neurons embedded in loop-like motifs act as central hubs for brain-wide integration.The Journal of physiology · 2026Article
- DHARANI: A 3D Developing Human-Brain Atlas Resource to Advance Neuroscience Internationally Integrated Multimodal Imaging and High-Resolution Histology of the Second Trimester.The Journal of comparative neurology · 2025Article
- Developing a multiscale neural connectivity knowledgebase of the autonomic nervous system.Frontiers in neuroinformatics · 2025Article
- Knowledge mining of brain connectivity in massive literature based on transfer learning.Bioinformatics (Oxford, England) · 2024Article
- Mapping sagittal-plane reference brain atlas of the cynomolgus macaque (Macaca fascicularis) based on consecutive cytoarchitectonic images.Brain structure & function · 2024Article
- Establishing neuroanatomical correspondences across mouse and marmoset brain structures.Research square · 2024Article
- Molecular ontology of the parabrachial nucleus.The Journal of comparative neurology · 2022Article
- Common and stimulus-type-specific brain representations of negative affect.Nature neuroscience · 2022Article
- Application of Supervised Machine Learning to Extract Brain Connectivity Information from Neuroscience Research Articles.Interdisciplinary sciences, computational life sciences · 2021Article
- Exploiting Gene Expression Profiles for the Automated Prediction of Connectivity between Brain Regions.International journal of molecular sciences · 2019Article
- Neuron Names: A Gene- and Property-Based Name Format, With Special Reference to Cortical Neurons.Frontiers in neuroanatomy · 2019Article
- The Representation of White Matter in the Central Nervous System.Frontiers in neuroanatomy · 2018Article
- An ontology-based search engine for digital reconstructions of neuronal morphology.Brain informatics · 2017Article
- Automated Neuroanatomical Relation Extraction: A Linguistically Motivated Approach with a PVT Connectivity Graph Case Study.Frontiers in neuroinformatics · 2016Article
- Large-scale extraction of brain connectivity from the neuroscientific literature.Bioinformatics (Oxford, England) · 2015Article
- Towards the automatic classification of neurons.Trends in neurosciences · 2015Review
- Automatic target validation based on neuroscientific literature mining for tractography.Frontiers in neuroanatomy · 2015Article
- Action and language mechanisms in the brain: data, models and neuroinformatics.Neuroinformatics · 2014Article
- Neural systems language: a formal modeling language for the systematic description, unambiguous communication, and automated digital curation of neural connectivity.The Journal of comparative neurology · 2013Article
- An ontology-based segmentation scheme for tracking postnatal changes in the developing rodent brain with MRI.NeuroImage · 2013Article
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2 authors.
Funding
Abstract
We describe in this paper the structure and main features of a domain specific ontology for neuroscience, the BAMS Neuroanatomical Ontology. The ontology includes a complete set of concepts that describe the parts of the rat nervous system, a growing set of concepts that describe neuron populations identified in different brain regions, and relationships between concepts. The ontology is linked with a complex representation of structural and physiological variables used to classify neurons, which is encoded in BAMS. BAMS Neuroanatomical Ontology is accessible on the web and includes an interface that allows browsing terms, viewing criteria for classification, and accessing associated information.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.