Evidence map›Paper›PMID 18974355›Full record

ArticleScience (New York, N.Y.)2008

HARP is an ATP-driven annealing helicase.

Timur Yusufzai, James T Kadonaga

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 169 citations in OpenAlex.

  1. Review
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  14. Critical DNA damaging pathways in tumorigenesis.Seminars in cancer biology · 2022
    Review
  15. Article
  16. Review
  17. Article
  18. Making Choices: DNA Replication Fork Recovery Mechanisms.Seminars in cell & developmental biology · 2021
    Review
  19. Article
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Timur YusufzaiSection of Molecular Biology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.
James T Kadonaga
University of California, San Diego · US

Funding

DNA REPLICATION COUPLED CHROMATIN ASSEMBLYR01GM058272 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KADONAGA, JAMES T. · 1999 to 2015
$4.8M
Characterization of novel core promoter elementsF32GM076936 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YUSUFZAI, TIMUR · 2006 to 2007
$95k
NIGMS NIH HHS F32 GM76936NIGMS NIH HHS GM058272NIGMS NIH HHS R01 GM058272
6 · The paper itself

Abstract

DNA-dependent adenosine triphosphatases (ATPases) participate in a broad range of biological processes including transcription, DNA repair, and chromatin dynamics. Mutations in the HepA-related protein (HARP) ATPase are responsible for Schimke immuno-osseous dysplasia (SIOD), but the function of the protein is unknown. We found that HARP is an ATP-dependent annealing helicase that rewinds single-stranded DNA bubbles that are stably bound by replication protein A. Other related ATPases, including the DNA translocase Rad54, did not exhibit annealing helicase activity. Analysis of mutant HARP proteins suggests that SIOD is caused by a deficiency in annealing helicase activity. Moreover, the pleiotropy of HARP mutations is consistent with the function of HARP as an annealing helicase that acts throughout the genome to oppose the action of DNA-unwinding activities in the nucleus.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateDNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedHumansImmunologic Deficiency SyndromesMutant ProteinsNuclear ProteinsNucleic Acid ConformationOsteochondrodysplasiasReplication Protein ASyndromeAdenosine TriphosphatasesAdenosine TriphosphateDNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedMutant ProteinsNuclear ProteinsRAD54L protein, humanReplication Protein ASMARCAL1 protein, human

Identifiers

PMID18974355
PMCPMC2587503
OpenAlexW2080781368

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.