Evidence map›Paper›PMID 18973473›Full record

ArticleThe Biochemical journal2009

The selenocysteine tRNA STAF-binding region is essential for adequate selenocysteine tRNA status, selenoprotein expression and early age survival of mice.

Bradley A Carlson, Ulrich Schweizer, Christine Perella, Rajeev K Shrimali, Lionel Feigenbaum, Liya Shen, Svetlana Speransky, Thomas Floss, Soon-Jeong Jeong, Jennifer Watts and 4 more

Open access · greenAbstract read
In one paragraph

Article in The Biochemical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Review
  3. The Effect of tRNAInternational journal of molecular sciences · 2021
    Article
  4. Review
  5. Molecules and cells · 2020
    Article
  6. Ribosome profiling of selenoproteinsThe Journal of biological chemistry · 2019
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Neuronal selenoprotein expression is required for interneuron development and prevents seizures and neurodegeneration.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2010
    Article
  17. Review
  18. The human selenoproteome: recent insights into functions and regulation.Cellular and molecular life sciences : CMLS · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Bradley A CarlsonMolecular Biology of Selenium Section, Laboratory of Cancer Prevention, Center for Cancer Research, NCI (National Cancer Institute), NIH (National Institutes of Health), Bethesda, MD 20892, USA.
Ulrich Schweizer
Christine Perella
Rajeev K Shrimali
Lionel Feigenbaum
Liya Shen
Svetlana Speransky
Thomas Floss
Soon-Jeong Jeong
Jennifer Watts
Victoria Hoffmann
Gerald F Combs
Vadim N Gladyshev
Dolph L Hatfield
Center for Cancer Research · USCharité - Universitätsmedizin Berlin · DEHelmholtz Zentrum München · DE

Funding

IDENTITY OF TERMINATOR AND SELENOCYSTEINE UGA CODONSR01GM061603 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI GLADYSHEV, VADIM N. · 2000 to 2016
$4.0M
Role of Selenium in Development and HealthZIABC005317 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HATFIELD, DOLPH · 2009 to 2014
$2.7M
Intramural NIH HHSNIGMS NIH HHS R01 GM061603
6 · The paper itself

Abstract

STAF [Sec (selenocysteine) tRNA gene transcription activating factor] is a transcription activating factor for a number of RNA Pol III- and RNA Pol II-dependent genes including the Trsp [Sec tRNA gene], which in turn controls the expression of all selenoproteins. Here, the role of STAF in regulating expression of Sec tRNA and selenoproteins was examined. We generated transgenic mice expressing the Trsp transgene lacking the STAF-binding site and made these mice dependent on the transgene for survival by removing the wild-type Trsp. The level of Sec tRNA was unaffected or slightly elevated in heart and testis, but reduced approximately 60% in liver and kidney, approximately 70% in lung and spleen and approximately 80% in brain and muscle compared with the corresponding organs in control mice. Moreover, the ratio of the two isoforms of Sec tRNA that differ by methylation at position 34 (Um34) was altered significantly, and the Um34-containing form was substantially reduced in all tissues examined. Selenoprotein expression in these animals was most affected in tissues in which the Sec tRNA levels were most severely reduced. Importantly, mice had a neurological phenotype strikingly similar to that of mice in which the selenoprotein P gene had been removed and their life span was substantially reduced. The results indicate that STAF influences selenoprotein expression by enhancing Trsp synthesis in an organ-specific manner and by controlling Sec tRNA modification in each tissue examined.

Indexed as

AgingAnimalsBrainImmunohistochemistryMiceMice, KnockoutOrgan SpecificityPhenotypeProtein BindingProtein IsoformsRNA, Transfer, Amino Acid-SpecificSelenoproteinsSurvival RateTrans-ActivatorsProtein IsoformsRNA, Transfer, Amino Acid-SpecificSelenoproteinsTrans-ActivatorstRNA, selenocysteine-Zfp143 protein, mouse

Identifiers

PMID18973473
PMCPMC2752860
OpenAlexW2030654895

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.