Evidence map›Paper›PMID 18972110›Full record

ArticleImmunogenetics2008

KIR haplotypes defined by segregation analysis in 59 Centre d'Etude Polymorphisme Humain (CEPH) families.

M P Martin, R M Single, M J Wilson, J Trowsdale, M Carrington

Erratum issuedAbstract read
In one paragraph

Article in Immunogenetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Haplotype-Based Analysis ofFrontiers in immunology · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Immunogenetics of HIV disease.Immunological reviews · 2013
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Innate immune genes synergize to predict increased risk of chronic disease in hepatitis C virus infection.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors.

M P MartinCancer and Inflammation Program, Laboratory of Experimental Immunology, SAIC-Frederick, Inc, NCI-Frederick, Frederick, MD, 21702, USA.
R M Single
M J Wilson
J Trowsdale
M Carrington

Funding

Molecular genetics and population studies of the KIR and HLA gene complexesZIABC010792 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CARRINGTON, MARY N. · 2009 to 2025
$7.8M
Effects of genetic polymorphism in the MHC, KIR, and related loci on human diseaZ01BC010791 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CARRINGTON, MARY N. · 2007 to 2008
$2.4M
CCR NIH HHS HHSN261200800001CIntramural NIH HHS Z01 BC010791Medical Research Council G0401569Medical Research Council G9800943NCI NIH HHS HHSN261200800001ENCI NIH HHS N01 CO012400NIAID NIH HHS N01 AI040076Wellcome Trust
6 · The paper itself

Abstract

The killer cell immunoglobulin-like receptor (KIR) gene cluster exhibits extensive allelic and haplotypic diversity. Variation at the locus is associated with an increasing number of human diseases, reminiscent of the HLA loci. Characterization of diversity at the KIR locus has progressed over the past several years, particularly since the sequence of entire KIR haplotypes have become available. To determine the extent of KIR haplotypic variability among individuals of northern European descent, we genotyped 59 CEPH families for presence/absence of all KIR genes and performed limited allelic subtyping at several KIR loci. A total of 20 unique haplotypes differing in gene content were identified, the most common of which was the previously defined A haplotype (f = 0.52). Several unusual haplotypes that probably arose as a consequence of unequal crossing over events were also identified. Linkage disequilibrium (LD) analysis indicated strong negative and positive LD between several pairs of genes, values that may be useful in determining haplotypic structure when family data are not available. These data provide a resource to aid in the interpretation of disease association data involving individuals of European descent.

Indexed as

Chromosome SegregationMultigene FamilyAllelesChromosomes, Human, Pair 19Cohort StudiesEvolution, MolecularGene FrequencyGenetic Predisposition to DiseaseGenetic VariationGenotypeHaplotypesHumansLinkage DisequilibriumPolymorphism, GeneticReceptors, KIRWhite PeopleReceptors, KIR

Identifiers

PMID18972110
PMCPMC3501931

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.