Evidence map›Paper›PMID 18971368›Full record

ArticleJournal of clinical microbiology2009

Phenotypic and genotypic analysis of enterotoxigenic Escherichia coli in samples obtained from Egyptian children presenting to referral hospitals.

H I Shaheen, I A Abdel Messih, J D Klena, A Mansour, Z El-Wakkeel, T F Wierzba, J W Sanders, S B Khalil, D M Rockabrand, M R Monteville and 3 more

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

  1. Comparative prevalence of diarrheagenicThe Pan African medical journal · 2024
    Article
  2. Article
  3. Confronting challenges to enterotoxigenicFrontiers in tropical diseases · 2021
    Article
  4. Article
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  6. Chaperone-Usher Pili Loci of Colonization Factor-Negative Human EnterotoxigenicFrontiers in cellular and infection microbiology · 2016
    Article
  7. Article
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  12. Molecular characterization of diarrheagenic Escherichia coli from Libya.The American journal of tropical medicine and hygiene · 2012
    Article
  13. Review
  14. The prevalence of enterotoxigenic e. Coli isolated from the stools of children aged 0-10 years with diarrhea in mid-anatolia region, Turkey.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2011
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

H I ShaheenU.S. Naval Medical Research Unit No. 3, Cairo, Egypt. hind.shaheen.eg@med.navy.mil
I A Abdel Messih
J D Klena
A Mansour
Z El-Wakkeel
T F Wierzba
J W Sanders
S B Khalil
D M Rockabrand
M R Monteville
P J Rozmajzl
A M Svennerholm
R W Frenck
United States Naval Medical Research Unit III · EGMinistry of Health and Population · EGUniversity of Gothenburg · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hospital surveillance was established in the Nile River Delta to increase the understanding of the epidemiology of diarrheal disease among Egyptian children. Between September 2000 and August 2003, samples obtained from children less than 5 years of age who had diarrhea and who were seeking hospital care were cultured for enteric bacteria. Colonies from each culture with a morphology typical of that of Escherichia coli were tested for the heat-labile (LT) and heat-stable (ST) toxins by a GM-1-specific enzyme-linked immunosorbent assay and colonization factor (CF) antigens by an immunodot blot assay. Enterotoxigenic E. coli (ETEC) isolates were recovered from 320/1,540 (20.7%) children, and ETEC isolates expressing a known CF were identified in 151/320 (47%) samples. ST CFA/I, ST CS6, ST CS14, and LT and ST CS5 plus CS6 represented 75% of the CFs expressed by ETEC isolates expressing a detectable CF. Year-to-year variability in the proportion of ETEC isolates that expressed a detectable CF was observed (e.g., the proportion that expressed CFA/I ranged from 10% in year 1 to 21% in year 3); however, the relative proportions of ETEC isolates expressing a CF were similar over the reporting period. The proportion of CF-positive ETEC isolates was higher among isolates that expressed ST. ETEC isolates expressing CS6 were isolated significantly less often (P < 0.001) than isolates expressing CFA/I in children less than 1 year of age. Macrorestriction profiling of CFA/I-expressing ETEC isolates by using the restriction enzyme XbaI and pulsed-field gel electrophoresis demonstrated a wide genetic diversity among the isolates that did not directly correlate with the virulence of the pathogen. The genome plasticity demonstrated in the ETEC isolates collected in this work suggests an additional challenge to the development of a globally effective vaccine for ETEC.

Indexed as

Bacterial ToxinsChild, PreschoolCluster AnalysisDeoxyribonucleases, Type II Site-SpecificDiarrheaDNA, BacterialDNA FingerprintingEgyptElectrophoresis, Gel, Pulsed-FieldEnterotoxigenic Escherichia coliEnterotoxinsEscherichia coli InfectionsEscherichia coli ProteinsFimbriae ProteinsGenetic VariationHospitalsBacterial Toxinscolonization factor antigensDeoxyribonucleases, Type II Site-SpecificDNA, Bacterialendodeoxyribonuclease XBAIEnterotoxinsEscherichia coli ProteinsFimbriae Proteinsheat-labile enterotoxin, E coliheat stable toxin (E coli)

Identifiers

PMID18971368
PMCPMC2620865
OpenAlexW2142135926

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.