Evidence map›Paper›PMID 18971268›Full record

ArticleJournal of virology2009

Temporal control of message stability in the life cycle of double-stranded RNA bacteriophage phi8.

Xueying Qiao, Yang Sun, Jian Qiao, Leonard Mindich

Abstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Role of host protein glutaredoxin 3 in the control of transcription during bacteriophage Phi2954 infection.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xueying QiaoDepartment of Microbiology, the Public Health Research Institute, Newark, New Jersey 07103, USA.
Yang Sun
Jian Qiao
Leonard Mindich
New Jersey Institute of Technology · US

Funding

PACKAGING OF THE SEGMENTED GENOME OF BACTERIOPHAGE PHI 6R01GM034352 · NIGMS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MINDICH, LEONARD E · 1985 to 2008
$3.1M
NIGMS NIH HHS GM34352NIGMS NIH HHS R01 GM034352
6 · The paper itself

Abstract

The cystoviruses have genomes of three double-stranded RNA segments. The genes of the L transcript are expressed early in infection, while those of M and S are expressed late. In all cystovirus groups but one, the quantity of the L transcript late in infection is lower than those of the other two because of transcriptional control. In bacteriophage Phi8 and its close relatives, transcription of L is not controlled; instead, the L transcript is turned over rapidly late in infection. The three messages are produced in approximately equal amounts early in infection, but the amount of L is less than 10% of the amounts of the others late in infection. The decay of the Phi8 L message depends upon the production of protein Hb, which is encoded in segment L. It also depends upon a target site within the H gene region. Phage mutants lacking either the Hb gene or the target region do not show the late control of L message quantity. In addition to having a role as a negative regulator, Hb functions to neutralize the activity of protein J, encoded by segment S, which causes the degradation of all viral transcripts.

Indexed as

RNA StabilityCystoviridaeGene Expression Regulation, ViralMolecular Sequence DataMutant ProteinsOpen Reading FramesRNA, ViralSequence Analysis, DNAViral ProteinsMutant ProteinsRNA, ViralViral Proteins

Identifiers

PMID18971268
PMCPMC2612379
OpenAlexW2105856514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.