Evidence map›Paper›PMID 18955593›Full record

ArticleThe Journal of general physiology2008

hERG gating microdomains defined by S6 mutagenesis and molecular modeling.

Sarah L Wynia-Smith, Anne Lynn Gillian-Daniel, Kenneth A Satyshur, Gail A Robertson

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Molecular Determinants of Voltage-Dependent Gating in Kv11.1 Channels.Advances in experimental medicine and biology · 2026
    Review
  3. Article
  4. The mechanism study ofTranslational cancer research · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. hERG Function in Light of Structure.Biophysical journal · 2020
    Review
  9. The EAG Voltage-Dependent KFrontiers in pharmacology · 2020
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. The enigmatic cytoplasmic regions of KCNH channels.Journal of molecular biology · 2015
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sarah L Wynia-SmithDepartment of Physiology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53706, USA.
Anne Lynn Gillian-Daniel
Kenneth A Satyshur
Gail A Robertson
University of Wisconsin–Madison · US

Funding

Training Program in Translational Cardiovascular Science (TPTCS)T32HL007936 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Lee Lochbaum Eckhardt, Gail A Robertson · 2001 to 2026
$11.6M
hERG Channel Assembly and TraffickingR01HL081780 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI ROBERTSON, GAIL A · 2005 to 2014
$3.2M
NHLBI NIH HHS HL081780NHLBI NIH HHS R01 HL081780NHLBI NIH HHS T32 HL007936NHLBI NIH HHS T32 HL07936
6 · The paper itself

Abstract

Human ether-à-go-go-related gene (hERG) channels mediate cardiac repolarization and bind drugs that can cause acquired long QT syndrome and life-threatening arrhythmias. Drugs bind in the vestibule formed by the S6 transmembrane domain, which also contains the activation gate that traps drugs in the vestibule and contributes to their efficacy of block. Although drug-binding residues have been identified, we know little about the roles of specific S6 residues in gating. We introduced cysteine mutations into the hERG channel S6 domain and measured mutational effects on the steady-state distribution and kinetics of transitions between the closed and open states. Energy-minimized molecular models based on the crystal structures of rKv1.2 (open state) and MlotiK1 and KcsA (closed state) provided structural contexts for evaluating mutant residues. The majority of mutations slowed deactivation, shifted conductance voltage curves to more negative potentials, or conferred a constitutive conductance over voltages that normally cause the channel to close. At the most intracellular extreme of the S6 region, Q664, Y667, and S668 were especially sensitive and together formed a ringed domain that occludes the pore in the closed state model. In contrast, mutation of S660, more than a full helical turn away and corresponding by alignment to a critical Shaker gate residue (V478), had little effect on gating. Multiple substitutions of chemically distinct amino acids at the adjacent V659 suggested that, upon closing, the native V659 side chain moves into a hydrophobic pocket but likely does not form the occluding gate itself. Overall, the study indicated that S6 mutagenesis disrupts the energetics primarily of channel closing and identified several residues critical for this process in the native channel.

Indexed as

Ion Channel GatingModels, MolecularAmino Acid SubstitutionAnimalsCatalytic DomainEnergy TransferEther-A-Go-Go Potassium ChannelsHumansHydrophobic and Hydrophilic InteractionsKineticsMembrane PotentialsMutagenesis, Site-DirectedOocytesProtein Interaction Domains and MotifsStructure-Activity RelationshipThermodynamicsEther-A-Go-Go Potassium Channels

Identifiers

PMID18955593
PMCPMC2571969
OpenAlexW2041971989

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.