Evidence map›Paper›PMID 18953341›Full record

ArticleNature genetics2008

Mutations of LRTOMT, a fusion gene with alternative reading frames, cause nonsyndromic deafness in humans.

Zubair M Ahmed, Saber Masmoudi, Ersan Kalay, Inna A Belyantseva, Mohamed Ali Mosrati, Rob W J Collin, Saima Riazuddin, Mounira Hmani-Aifa, Hanka Venselaar, Mayya N Kawar and 16 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 87 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Identification a novel pathogenic LRTOMT mutation in Mauritanian families with nonsyndromic deafness.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2023
    Article
  8. Article
  9. Molecular aetiology of ski-slope hearing loss and audiological course of cochlear implantees.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2022
    Article
  10. ARNSHL gene identification: past, present and future.Molecular genetics and genomics : MGG · 2022
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Function and Dysfunction of TMC Channels in Inner Ear Hair Cells.Cold Spring Harbor perspectives in medicine · 2019
    Review
  17. Molecular Structure of the Hair Cell Mechanoelectrical Transduction Complex.Cold Spring Harbor perspectives in medicine · 2019
    Review
  18. Article
  19. Genetic Hearing Loss and Gene Therapy.Genomics & informatics · 2018
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 8 institutions in 5 countries.

Zubair M AhmedLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, Rockville, Maryland 20850, USA.
Saber Masmoudi
Ersan Kalay
Inna A Belyantseva
Mohamed Ali Mosrati
Rob W J Collin
Saima Riazuddin
Mounira Hmani-Aifa
Hanka Venselaar
Mayya N Kawar
Abdelaziz Tlili
Bert van der Zwaag
Shahid Y Khan
Leila Ayadi
S Amer Riazuddin
Robert J Morell
Andrew J Griffith
Ilhem Charfedine
Refik Caylan
Jaap Oostrik
Ahmet Karaguzel
Abdelmonem Ghorbel
Sheikh Riazuddin
Thomas B Friedman
Hammadi Ayadi
Hannie Kremer
National Institute on Deafness and Other Communication Disorders · USRadboud University Medical Center · NLHopital Universitaire Habib Bourguiba · TNKaradeniz Technical University · TRRadboud University Nijmegen · NLUniversity of the Punjab · PKCentre of Excellence in Molecular Biology · PKUniversity Medical Center Utrecht · NL

Funding

Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZIADC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS · 2009 to 2025
$48.7M
Molecular Analysis Of Human Hereditary DeafnessZIADC000060 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI ROUX, ISABELLE · 2009 to 2022
$18.4M
Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZ01DC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS BAER · 1997 to 2008
$7.2M
Molecular Analysis Of Human Hereditary DeafnessZ01DC000060 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI GRIFFITH, ANDREW J · 2001 to 2008
$3.0M
Clinical Analysis Of Disorders Of Hearing And BalanceZ01DC000064 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI GRIFFITH, ANDREW J · 2001 to 2008
$1.2M
MOLECULAR GENETICS OF USHER SYNDROME TYPE IR00DC009287 · NIDCD · CINCINNATI CHILDRENS HOSP MED CTR · PI AHMED, ZUBAIR M. · 2009 to 2011
$732k
MAPPING AND CLONING HEREDITARY HEARING IMPAIRMENT GENESZ01DC000035 · NIDCD · DEAFNESS &OTHER COMMUNICATION DISORDERS · PI WILCOX, EDWARD R. · 1997 to 2002
–
Intramural NIH HHS Z01 DC000035Intramural NIH HHS Z01 DC000039Intramural NIH HHS Z01 DC000060Intramural NIH HHS Z01 DC000064NIDCD NIH HHS K99 DC009287NIDCD NIH HHS R00 DC009287
6 · The paper itself

Abstract

Many proteins necessary for sound transduction have been identified through positional cloning of genes that cause deafness. We report here that mutations of LRTOMT are associated with profound nonsyndromic hearing loss at the DFNB63 locus on human chromosome 11q13.3-q13.4. LRTOMT has two alternative reading frames and encodes two different proteins, LRTOMT1 and LRTOMT2, detected by protein blot analyses. LRTOMT2 is a putative methyltransferase. During evolution, new transcripts can arise through partial or complete coalescence of genes. We provide evidence that in the primate lineage LRTOMT evolved from the fusion of two neighboring ancestral genes, which exist as separate genes (Lrrc51 and Tomt) in rodents.

Indexed as

AdolescentAdultAnimalsBase SequenceCarnitine O-PalmitoyltransferaseChromosomes, Human, Pair 11DeafnessEar, InnerFamilyGenetic LinkageHumansLeucine-Rich Repeat ProteinsMiceModels, MolecularMolecular Sequence DataMutationCarnitine O-PalmitoyltransferaseLeucine-Rich Repeat ProteinsLRTOMT protein, humanProteins

Identifiers

PMID18953341
PMCPMC3404732
OpenAlexW2105028664

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.