Evidence map›Paper›PMID 18952825›Full record

ArticleHuman molecular genetics2009

Common variants in the JAZF1 gene associated with height identified by linkage and genome-wide association analysis.

Asa Johansson, Fabio Marroni, Caroline Hayward, Christopher S Franklin, Anatoly V Kirichenko, Inger Jonasson, Andrew A Hicks, Veronique Vitart, Aaron Isaacs, Tatiana Axenovich and 26 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 6 pooled it
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 6 syntheses or guidelines pooled it, 96 citations in OpenAlex.

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  9. Deletion ofProceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 13 institutions in 9 countries.

Asa JohanssonRudbeck Laboratory, Department of Genetics and Pathology, Uppsala University, SE-751 85 Uppsala, Sweden.
Fabio Marroni
Caroline Hayward
Christopher S Franklin
Anatoly V Kirichenko
Inger Jonasson
Andrew A Hicks
Veronique Vitart
Aaron Isaacs
Tatiana Axenovich
Susan Campbell
Malcolm G Dunlop
Jamie Floyd
Nick Hastie
Albert Hofman
Sara Knott
Ivana Kolcic
Irene Pichler
Ozren Polasek
Fernando Rivadeneira
Albert Tenesa
André G Uitterlinden
Sarah H Wild
Irina V Zorkoltseva
Thomas Meitinger
James F Wilson
Igor Rudan
Harry Campbell
Cristian Pattaro
Peter Pramstaller
Ben A Oostra
Alan F Wright
Cornelia M van Duijn
Yurii S Aulchenko
Ulf Gyllensten
EUROSPAN Consortium
Eurac Research · ITPediatrics and Genetics · USWestern General Hospital · GBPublic Health Scotland · GBInstitute of Cytology and Genetics · RUUppsala University · SEErasmus MC · NLInstitute of Genetics and Cancer · GBUniversity of Zagreb · HRCentre for Immunity, Infection and Evolution · GBHelmholtz Zentrum München · DERoslin Institute · GBSisters of Charity Hospital · HR

Funding

Cancer Research UK C348/A3758Cancer Research UK C348/A8896Cancer Research UK C48/A6361Chief Scientist Office CZB/4/449Chief Scientist Office CZB/4/710Chief Scientist Office K/OPR/2/2/D333Medical Research Council G0000657-53203Medical Research Council MC_U127527198Medical Research Council MC_U127561128
6 · The paper itself

Abstract

Genes for height have gained interest for decades, but only recently have candidate genes started to be identified. We have performed linkage analysis and genome-wide association for height in approximately 4000 individuals from five European populations. A total of five chromosomal regions showed suggestive linkage and in one of these regions, two SNPs (rs849140 and rs1635852) were associated with height (nominal P = 7.0 x 10(-8) and P = 9.6 x 10(-7), respectively). In total, five SNPs across the genome showed an association with height that reached the threshold of genome-wide significance (nominal P < 1.6 x 10(-7)). The association with height was replicated for two SNPs (rs1635852 and rs849140) using three independent studies (n = 31 077, n=1268 and n = 5746) with overall meta P-values of 9.4 x 10(-10) and 5.3 x 10(-8). These SNPs are located in the JAZF1 gene, which has recently been associated with type II diabetes, prostate and endometrial cancer. JAZF1 is a transcriptional repressor of NR2C2, which results in low IGF1 serum concentrations, perinatal and early postnatal hypoglycemia and growth retardation when knocked out in mice. Both the linkage and association analyses independently identified the JAZF1 region affecting human height. We have demonstrated, through replication in additional independent populations, the consistency of the effect of the JAZF1 SNPs on height. Since this gene also has a key function in the metabolism of growth, JAZF1 represents one of the strongest candidates influencing human height identified so far.

Indexed as

Genetic LinkageGenome-Wide Association StudyBody HeightCo-Repressor ProteinsDNA-Binding ProteinsFemaleHumansMaleMiddle AgedNeoplasm ProteinsPolymorphism, Single NucleotideWhite PeopleCo-Repressor ProteinsDNA-Binding ProteinsJAZF1 protein, humanNeoplasm Proteins

Identifiers

PMID18952825
PMCPMC2638782
OpenAlexW2120228744

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.