Evidence map›Paper›PMID 18952794›Full record

ArticleJournal of bacteriology2009

An unexpected effect of tetracycline concentration: growth phase-associated excision of the Bacteroides mobilizable transposon NBU1.

Bo Song, Gui-Rong Wang, Nadja B Shoemaker, Abigail A Salyers

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Bo SongDepartment of Microbiology, University of Illinois, Urbana, IL 61801, USA.
Gui-Rong Wang
Nadja B Shoemaker
Abigail A Salyers
University of Illinois Urbana-Champaign · US

Funding

NETWORK TO MONITOR RESISTANCE IN COMMENSAL BACTERIAR01AI022383 · NIAID · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI SALYERS, ABIGAIL A · 1985 to 2010
$3.0M
Conjugal Transfer of Bacteriodes Antibiotic ResistancesR56AI022383 · NIAID · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI GARDNER, JEFFREY F · 2011 to 2011
$359k
NIAID NIH HHS AI/GM 22383NIAID NIH HHS R01 AI022383NIAID NIH HHS R56 AI022383
6 · The paper itself

Abstract

Early studies of the Bacteroides mobilizable transposon NBU1 established that excision, the first step in NBU1 transfer, requires exposure of the cells to tetracycline. More recently, we found that excision is also associated with growth phase; even after exposure to tetracycline, excision is detectable only after the cells enter late exponential phase. The tetracycline effect is mediated by a two-component regulatory system, RteA and RteB, which is provided in trans by an integrated self-transmissible element, CTnDOT. The rteA and rteB genes are part of a three-gene operon that also contains the tetracycline resistance gene tetQ. We report here that neither transcription nor translation of the tetQ-rteA-rteB operon is affected by growth phase. Moreover, RteA is not required for the growth phase effect, because a mutant form of RteB that does not require phosphorylation by RteA did not make excision independent of growth phase. Two conditions made NBU1 excision independent of growth phase. One was reducing the tetracycline concentration from an inhibitory concentration (1 microg/ml) to a subinhibitory level (0.05 microg/ml). Independence of growth phase also occurred when rteA and rteB were placed under the control of a heterologous maltose-inducible promoter, P(susA). Our results suggest that at low concentrations of tetracycline, ribosomes are capable of translating enough RteA and RteB for excision to occur. At higher tetracycline concentrations, however, TetQ is needed to protect enough ribosomes to allow the translation of excision genes, and this protection takes time to develop. Thus, subinhibitory concentrations of tetracycline may increase the probability of gene transfer because, in contrast to inhibitory concentrations, excision can occur at all phases of growth.

Indexed as

Bacterial ProteinsBacteroidesDNA Transposable ElementsGene Expression Regulation, BacterialModels, BiologicalMutagenesis, Site-DirectedOperonReverse Transcriptase Polymerase Chain ReactionSequence Analysis, DNATetracyclineTranscription FactorsBacterial ProteinsDNA Transposable ElementsRteA protein, BacteriodesRteB protein, BacteriodesTetracyclineTranscription Factors

Identifiers

PMID18952794
PMCPMC2632058
OpenAlexW2107546617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.