Evidence map›Paper›PMID 18952783›Full record

ArticleJournal of molecular endocrinology2009

Role of SP transcription factors in hormone-dependent modulation of genes in MCF-7 breast cancer cells: microarray and RNA interference studies.

Fei Wu, Ivan Ivanov, Rui Xu, Stephen Safe

Abstract read
In one paragraph

Article in Journal of molecular endocrinology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. DDX3X Biomarker Correlates with Poor Survival in Human Gliomas.International journal of molecular sciences · 2015
    Article
  2. Article
  3. miRNAs and estrogen action.Trends in endocrinology and metabolism: TEM · 2012
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Fei WuDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.
Ivan Ivanov
Rui Xu
Stephen Safe
Texas A&M Health Science Center · USTexas A&M University · US

Funding

WASTE SITE ASSESSMENTP42ES004917 · NIEHS · TEXAS A&M UNIVERSITY SYSTEM · PI SAFE, STEPHEN H. · 1989 to 2009
$10.4M
Pilot--Health Science ResearchP30ES009106 · NIEHS · TEXAS A&M UNIVERSITY SYSTEM · PI SAFE, STEPHEN H. · 1998 to 2006
$9.2M
Coactivation of Estrogen Receptor alpha/Sp1R01CA104116 · NCI · TEXAS A&M UNIVERSITY SYSTEM · PI SAFE, STEPHEN H. · 2004 to 2006
$682k
NCI NIH HHS R01 CA104116NIEHS NIH HHS ES04917NIEHS NIH HHS ES09106NIEHS NIH HHS P30 ES009106NIEHS NIH HHS P42 ES004917PHS HHS A104116
6 · The paper itself

Abstract

17beta-estradiol (E(2)) binds estrogen receptor alpha (ESR1) in MCF-7 cells and increases cell proliferation and survival through induction or repression of multiple genes. ESR1 interactions with DNA-bound specificity protein (SP) transcription factors is a nonclassical genomic estrogenic pathway and the role of SP transcription factors in mediating hormone-dependent activation or repression of genes in MCF-7 cells was investigated by microarrays and RNA interference. MCF-7 cells were transfected with a nonspecific oligonucleotide or a cocktail of small inhibitory RNAs (iSP), which knockdown SP1, SP3, and SP4 proteins, and treated with dimethylsulfoxide or 10 nM E(2) for 6 h. E(2) induced 62 and repressed 134 genes and the induction or repression was reversed in approximately 62% of the genes in cells transfected with iSP (ESR1/SP dependent), whereas hormonal activation or repression of the remaining genes was unaffected by iSP (SP independent). Analysis of the ESR1/SP-dependent and SP-independent genes showed minimal overlap with respect to the GO terms (functional processes) in genes induced or repressed, suggesting that the different genomic pathways may contribute independently to the hormone-induced phenotype in MCF-7 cells.

Indexed as

Breast NeoplasmsGene Expression Regulation, NeoplasticCell Line, TumorEstrogen Receptor alphaFemaleGene Expression ProfilingHumansMolecular Sequence DataOligonucleotide Array Sequence AnalysisRNA InterferenceSp Transcription FactorsESR1 protein, humanEstrogen Receptor alphaSp Transcription Factors

Identifiers

PMID18952783
PMCPMC2642616
OpenAlexW2165825226

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.