Evidence map›Paper›PMID 18952129›Full record

ArticleBiochimica et biophysica acta2009

Alternatively spliced exon 5 of the FERM domain of protein 4.1R encodes a novel binding site for erythrocyte p55 and is critical for membrane targeting in epithelial cells.

Pil-Soo Seo, Jong-Jin Jeong, Lixiao Zeng, Christos G Takoudis, Brendan J Quinn, Anwar A Khan, Toshihiko Hanada, Athar H Chishti

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Pil-Soo SeoDepartment of Pharmacology, UIC Cancer Center, University of Illinois College of Medicine, Chicago, IL 60612, USA.
Jong-Jin Jeong
Lixiao Zeng
Christos G Takoudis
Brendan J Quinn
Anwar A Khan
Toshihiko Hanada
Athar H Chishti
University of Illinois Urbana-Champaign · USUniversity of Illinois Chicago · US

Funding

Cytoskeletal Interactions of Human Dlg ProteinR01CA094414 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI CHISHTI, ATHAR H. · 2002 to 2006
$1.4M
MURINE P55 FUNCTION IN VIVOR01HL060755 · NHLBI · CARITAS ST. ELIZABETH'S MEDICAL CENTER · PI CHISHTI, ATHAR H. · 1998 to 2001
$575k
NCI NIH HHS CA 94414NCI NIH HHS R01 CA094414NHLBI NIH HHS HL60755NHLBI NIH HHS R01 HL060755
6 · The paper itself

Abstract

Direct physical linkage of MAGUKs to the actin cytoskeleton was first established by the interaction of erythrocyte p55 with the FERM domain of protein 4.1R. Subsequently, it was reported that p55 binds to a 51-amino acid peptide, encoded by exon 10, located within the FERM domain of protein 4.1R. In this study, we investigated the nature of the p55-FERM domain binding interface and show that p55 binds to a second 35-amino acid peptide, encoded by an alternatively spliced exon 5, located within the FERM domain of protein 4.1R. Competition and Surface Plasmon Resonance-binding measurements suggest that the peptides encoded by exons 5 and 10 bind to independent sites within the D5 domain of p55. Interestingly, the full length 135 kDa isoform of protein 4.1R containing both exons 5 and 10 was targeted exclusively to the plasma membrane of epithelial cells whereas the same isoform without exon 5 completely lost its membrane localization capacity. Together, these results indicate that p55 binds to two distinct sites within the FERM domain, and the alternatively spliced exon 5 is necessary for the membrane targeting of protein 4.1R in epithelial cells. Since sequences similar to the exon 5-peptide of protein 4.1R and D5 domain of p55 are conserved in many proteins, our findings suggest that a similar mechanism may govern the membrane targeting of other FERM domain containing proteins.

Indexed as

Alternative SplicingAnimalsBinding, CompetitiveBinding SitesBlood ProteinsCell MembraneCytoskeletal ProteinsDogsEpithelial CellsExonsHumansMembrane ProteinsModels, BiologicalPeptidesProtein BindingProtein IsoformsBlood ProteinsCytoskeletal Proteinserythrocyte membrane band 4.1 proteinMembrane ProteinsMPP1 protein, humanPeptidesProtein Isoforms

Identifiers

PMID18952129
PMCPMC2722380
OpenAlexW2135683634

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.