Evidence map›Paper›PMID 18945934›Full record

ArticlePlant physiology2008

The Arabidopsis calcium sensor calcineurin B-like 3 inhibits the 5'-methylthioadenosine nucleosidase in a calcium-dependent manner.

Seung-Ick Oh, Jimyeong Park, Sunhee Yoon, Yungyeong Kim, Soojin Park, Migyeong Ryu, Min Jung Nam, Sung Han Ok, Jeong-Kook Kim, Jeong-Sheop Shin and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Ectopic Expression ofFrontiers in plant science · 2018
    Article
  3. The CBL and CIPK Gene Family in Grapevine (Frontiers in plant science · 2017
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Seung-Ick OhDepartment of Molecular Biology, Sejong University, Seoul 143-747, Korea.
Jimyeong Park
Sunhee Yoon
Yungyeong Kim
Soojin Park
Migyeong Ryu
Min Jung Nam
Sung Han Ok
Jeong-Kook Kim
Jeong-Sheop Shin
Kyung-Nam Kim
Korea University · KRSejong University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcineurin B-like (CBL) proteins represent a unique family of calcium sensors in plant cells. Sensing the calcium signals elicited by a variety of abiotic stresses, CBLs transmit the information to a group of serine/threonine protein kinases (CBL-interacting protein kinases [CIPKs]), which are currently known as the sole targets of the CBL family. Here, we report that the CBL3 member of this family has a novel interaction partner in addition to the CIPK proteins. Extensive yeast two-hybrid screenings with CBL3 as bait identified an interesting Arabidopsis (Arabidopsis thaliana) cDNA clone (named AtMTAN, for 5'-methylthioadenosine nucleosidase), which encodes a polypeptide similar to EcMTAN from Escherichia coli. Deletion analyses showed that CBL3 utilizes the different structural modules to interact with its distinct target proteins, CIPKs and AtMTAN. In vitro and in vivo analyses verified that CBL3 and AtMTAN physically associate only in the presence of Ca(2+). In addition, we empirically demonstrated that the AtMTAN protein indeed possesses the MTAN activity, which can be inhibited specifically by Ca(2+)-bound CBL3. Overall, these findings suggest that the CBL family members can relay the calcium signals in more diverse ways than previously thought. We also discuss a possible mechanism by which the CBL3-mediated calcium signaling regulates the biosynthesis of ethylene and polyamines, which are involved in plant growth and development as well as various stress responses.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsCalciumCalcium-Binding ProteinsCalcium SignalingGlucuronidaseGreen Fluorescent ProteinsMolecular Sequence DataOnionsProtein Interaction MappingPurine-Nucleoside PhosphorylaseRecombinant Fusion ProteinsSequence AlignmentTwo-Hybrid System Techniques5'-methylthioadenosine phosphorylaseArabidopsis ProteinsCalciumCalcium-Binding ProteinsCBL3 protein, ArabidopsisGlucuronidaseGreen Fluorescent ProteinsPurine-Nucleoside PhosphorylaseRecombinant Fusion Proteins

Identifiers

PMID18945934
PMCPMC2593668
OpenAlexW2023085878

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.