Evidence map›Paper›PMID 18940790›Full record

ArticleGenetics2008

Coprinus cinereus rad50 mutants reveal an essential structural role for Rad50 in axial element and synaptonemal complex formation, homolog pairing and meiotic recombination.

Sonia N Acharya, Alexander M Many, Andrew P Schroeder, Felicia M Kennedy, Oleksandr P Savytskyy, Jennifer T Grubb, Jack A Vincent, Elizabeth A Friedle, Martina Celerin, Daniel S Maillet and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Sonia N AcharyaThe Scripps Research Institute, La Jolla, California 92037, USA.
Alexander M Many
Andrew P Schroeder
Felicia M Kennedy
Oleksandr P Savytskyy
Jennifer T Grubb
Jack A Vincent
Elizabeth A Friedle
Martina Celerin
Daniel S Maillet
Heather J Palmerini
Megan A Greischar
Gabriel Moncalian
R Scott Williams
John A Tainer
Miriam E Zolan
Indiana University Bloomington · USScripps Research Institute · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
Mre11/Rad50 Structural Biology for DNA Damage ResponsesR01CA117638 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI RUSSELL, PAUL, TAINER, JOHN A. · 2005 to 2019
$5.6M
RADIATION REPAIR AND MEIOSIS IN COPRINUS CINEREUSR01GM043930 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI ZOLAN, MIRIAM E · 1995 to 2009
$2.7M
RADIATION REPAIR AND MEIOSIS IN COPRINUS CINEREUSR29GM043930 · NIGMS · INDIANA UNIVERSITY BLOOMINGTON · PI ZOLAN, MIRIAM E · 1990 to 1994
–
NCI NIH HHS CA092584NCI NIH HHS CA117638NCI NIH HHS P01 CA092584NCI NIH HHS R01 CA117638NIGMS NIH HHS GM43930NIGMS NIH HHS R01 GM043930PHS HHS T32 GMOO7757
6 · The paper itself

Abstract

The Mre11/Rad50/Nbs1 (MRN) complex is required for eukaryotic DNA double-strand break (DSB) repair and meiotic recombination. We cloned the Coprinus cinereus rad50 gene and showed that it corresponds to the complementation group previously named rad12, identified mutations in 15 rad50 alleles, and mapped two of the mutations onto molecular models of Rad50 structure. We found that C. cinereus rad50 and mre11 mutants arrest in meiosis and that this arrest is Spo11 dependent. In addition, some rad50 alleles form inducible, Spo11-dependent Rad51 foci and therefore must be forming meiotic DSBs. Thus, we think it likely that arrest in both mre11-1 and the collection of rad50 mutants is the result of unrepaired or improperly processed DSBs in the genome and that Rad50 and Mre11 are dispensable in C. cinereus for DSB formation, but required for appropriate DSB processing. We found that the ability of rad50 mutant strains to form Rad51 foci correlates with their ability to promote synaptonemal complex formation and with levels of stable meiotic pairing and that partial pairing, recombination initiation, and synapsis occur in the absence of wild-type Rad50 catalytic domains. Examination of single- and double-mutant strains showed that a spo11 mutation that prevents DSB formation enhances axial element (AE) formation for rad50-4, an allele predicted to encode a protein with intact hook region and hook-proximal coiled coils, but not for rad50-1, an allele predicted to encode a severely truncated protein, or for rad50-5, which encodes a protein whose hook-proximal coiled-coil region is disrupted. Therefore, Rad50 has an essential structural role in the formation of AEs, separate from the DSB-processing activity of the MRN complex.

Indexed as

MutationAllelesCoprinusDNA, FungalDNA RepairFungal ProteinsMeiosisMicroscopy, ElectronRecombination, GeneticSpores, FungalSynaptonemal ComplexDNA, FungalFungal Proteins

Identifiers

PMID18940790
PMCPMC2600930
OpenAlexW2002926108

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.