Evidence map›Paper›PMID 18939859›Full record

ArticleBioconjugate chemistry2008

NLS peptide conjugated molecular beacons for visualizing nuclear RNA in living cells.

Nitin Nitin, Gang Bao

Abstract read
In one paragraph

Article in Bioconjugate chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 43 citations in OpenAlex.

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  15. Fluorescent probes for live-cell RNA detection.Annual review of biomedical engineering · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Nitin NitinDepartment of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332, USA.
Gang Bao
Emory University · US

Funding

Nanomedicine Center for Nucleoprotein MachinesPN2EY018244 · NEI · RICE UNIVERSITY · PI BAO, GANG · 2006 to 2015
$24.4M
Nanotechnology: Detection &Analysis of Plaque FormationU01HL080711 · NHLBI · EMORY UNIVERSITY · PI BAO, GANG · 2005 to 2009
$11.0M
In vivo gene detection for cancer analysisR42CA103103 · NCI · VIVONETICS, INC. · PI BAO, GANG · 2006 to 2007
$1.7M
NCI NIH HHS R42 CA103103NEI NIH HHS PN2 EY018244NEI NIH HHS PN2EY018244NHLBI NIH HHS U01 HL080711
6 · The paper itself

Abstract

Imaging the expression and localization of RNAs in live-cell nucleus can provide important information on RNA synthesis, processing, and transport. Here, we report the development of a bifunctional molecular beacon (NLS-MB) composed of a single nuclear localization sequence (NLS) peptide conjugated to a molecular beacon for efficient delivery and imaging of endogenous RNAs in the nuclei of living cells. We characterized the NLS-MBs by comparing their signal-to-noise ratios with unmodified molecular beacons and determined their efficiency of nuclear import. We demonstrated the specificity and sensitivity of the method by observing in living cells the localization and colocalization of small nuclear RNAs (snRNA) U1 and U2 at discrete foci in the nucleoplasm, and the localization of small nucleolar RNA U3 in the nucleolus. These snRNAs were chosen because of their essential roles in RNA biogenesis. The results were validated using in situ hybridization as positive control and random beacons as negative control. This novel approach may be applied to imaging other nuclear RNAs and pre-mRNAs in living cells.

Indexed as

Base SequenceCell Membrane PermeabilityCell NucleusCell SurvivalCross-Linking ReagentsDrug DesignHeLa CellsHumansIn Situ Hybridization, FluorescenceNuclear Localization SignalsRNA Processing, Post-TranscriptionalRNA, Small NuclearRNA, Small NucleolarSubstrate SpecificityCross-Linking ReagentsNuclear Localization SignalsRNA, Small NuclearRNA, Small Nucleolar

Identifiers

PMID18939859
PMCPMC3170665
OpenAlexW2008731117

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.