Evidence map›Paper›PMID 18938748›Full record

ArticleScandinavian journal of gastroenterology2008

Quantitative analysis of the effect of Helicobacter pylori on the expressions of SOX2, CDX2, MUC2, MUC5AC, MUC6, TFF1, TFF2, and TFF3 mRNAs in human gastric carcinoma cells.

Kazuyuki Matsuda, Kazuyoshi Yamauchi, Takehisa Matsumoto, Kenji Sano, Yoshio Yamaoka, Hiroyoshi Ota

Open access · greenAbstract read
In one paragraph

Article in Scandinavian journal of gastroenterology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 47 citations in OpenAlex.

  1. Optimization ofInternational journal of molecular sciences · 2024
    Article
  2. Article
  3. Review
  4. TFF1 Induces Aggregation and Reduces Motility ofInternational journal of molecular sciences · 2021
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Transfection of theOncology letters · 2018
    Article
  11. Article
  12. Review
  13. Review
  14. Gastric TFF1 Expression from Acute to ChronicFrontiers in cellular and infection microbiology · 2017
    Article
  15. Article
  16. Paradoxical role of SOX2 in gastric cancer.American journal of cancer research · 2016
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kazuyuki MatsudaDepartment of Laboratory Medicine, Shinshu University Hospital, Asahi, Matsumoto, Japan.
Kazuyoshi Yamauchi
Takehisa Matsumoto
Kenji Sano
Yoshio Yamaoka
Hiroyoshi Ota
Shinshu University Hospital · JPMichael E. DeBakey VA Medical Center · USShinshu University · JP

Funding

REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
NIDDK NIH HHS DK62813NIDDK NIH HHS R01 DK062813
6 · The paper itself

Abstract

objectiveTo investigate the phenotypic characters of carcinoma cells and the response of gastric epithelial cells to Helicobacter pylori (H. pylori) infection using the gastric carcinoma cell lines. MATERIAL AND

methodsReal-time reverse transcription-polymerase chain reaction (RT-PCR) was used to assess the effect of H. pylori infection on mRNA levels of transcription factors (SOX2 and CDX2), mucin core proteins (MUC2, MUC5AC, and MUC6), and trefoil factor family peptides (TFF) (TFF1, TFF2, and TFF3) in gastric carcinoma cells (AGS, MKN45, and KATO III cells). H. pylori ATCC 43504 and its isogenic cag pathogenicity island (PAI) deleted mutant were used.

resultsThese cell lines expressed mixed gastric and intestinal phenotypes. The intestinal phenotype predominated in AGS cells and gastric phenotypes in MKN45 and KATO III cells. In all three cell lines, H. pylori infection inhibited SOX2 mRNA expression, but induced the three TFFs mRNAs. In AGS cells, H. pylori induced cag PAI-dependent mRNA expression of CDX2, MUC2, MUC5AC, and MUC6. mRNA expressions of CDX2, MUC5AC, and MUC6 were inhibited in KATO III cells, whereas MUC2 mRNA expression was unchanged. In MKN45 cells, H. pylori induced the three MUCs mRNAs but inhibited CDX2 mRNA expression.

conclusionsThis study provides a useful platform for selecting appropriate cell lines to model H. pylori-related changes in the gastric epithelium that mirror the changes seen in vivo. The outcome of H. pylori infection may reflect changes in the mucus gel layer caused by altered expression of mucins and TFF peptides.

Indexed as

Helicobacter pyloriCDX2 Transcription FactorCell LineDNA-Binding ProteinsHelicobacter InfectionsHMGB ProteinsHomeodomain ProteinsHumansMucin-2Mucin 5ACMucin-6MucinsPeptidesReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSOXB1 Transcription FactorsCDX2 protein, humanCDX2 Transcription FactorDNA-Binding ProteinsHMGB ProteinsHomeodomain ProteinsMUC2 protein, humanMUC5AC protein, humanMUC6 protein, humanMucin-2Mucin 5ACMucin-6MucinsPeptidesRNA, MessengerSOX2 protein, humanSOXB1 Transcription FactorsTFF1 protein, humanTFF2 protein, humanTFF3 protein, humanTranscription FactorsTrefoil Factor-1Trefoil Factor-2Trefoil Factor-3Tumor Suppressor Proteins

Identifiers

PMID18938748
PMCPMC3128253
OpenAlexW2019418214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.