Evidence map›Paper›PMID 18937032›Full record

ArticleJournal of biomolecular NMR2008

Biosynthesis and NMR-studies of a double transmembrane domain from the Y4 receptor, a human GPCR.

Chao Zou, Fred Naider, Oliver Zerbe

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Journal of biomolecular NMR, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. A Paradigm for Peptide Hormone-GPCR Analyses.Molecules (Basel, Switzerland) · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Chao ZouInstitute of Organic Chemistry, University of Zurich, Switzerland.
Fred Naider
Oliver Zerbe
University of Zurich · CHCollege of Staten Island · US

Funding

PEPTIDE-CELL INTERACTIONS IN SACCHAROMYCES CEREVISIAER01GM022086 · NIGMS · COLLEGE OF STATEN ISLD ST. GEORGE CAMPUS · PI NAIDER, FRED R · 1985 to 2006
$2.5M
Peptide-Cell Interactions in Saccharomyces cerevisiaeR56GM022086 · NIGMS · COLLEGE OF STATEN ISLAND · PI NAIDER, FRED R · 2007 to 2007
$371k
NIGMS NIH HHS GM22086
6 · The paper itself

Abstract

The human Y4 receptor, a class A G-protein coupled receptor (GPCR) primarily targeted by the pancreatic polypeptide (PP), is involved in a large number of physiologically important functions. This paper investigates a Y4 receptor fragment (N-TM1-TM2) comprising the N-terminal domain, the first two transmembrane (TM) helices and the first extracellular loop followed by a (His)(6) tag, and addresses synthetic problems encountered when recombinantly producing such fragments from GPCRs in Escherichia coli. Rigorous purification and usage of the optimized detergent mixture 28 mM dodecylphosphocholine (DPC)/118 mM% 1-palmitoyl-2-hydroxy-sn-glycero-3-[phospho-rac-(1-glycerol)] (LPPG) resulted in high quality TROSY spectra indicating protein conformational homogeneity. Almost complete assignment of the backbone, including all TM residue resonances was obtained. Data on internal backbone dynamics revealed a high secondary structure content for N-TM1-TM2. Secondary chemical shifts and sequential amide proton nuclear Overhauser effects defined the TM helices. Interestingly, the properties of the N-terminal domain of this large fragment are highly similar to those determined on the isolated N-terminal domain in the presence of DPC micelles.

Indexed as

Cell MembraneChromatography, AffinityCloning, MolecularDetergentsEscherichia coliHumansMicellesModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein Structure, TertiaryReceptors, Neuropeptide YRecombinant ProteinsDetergentsMicellesneuropeptide Y4 receptorReceptors, Neuropeptide YRecombinant Proteins

Identifiers

PMID18937032
OpenAlexW2037260827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.