Evidence map›Paper›PMID 18936160›Full record

ArticleMolecular and cellular biology2009

TRBP control of PACT-induced phosphorylation of protein kinase R is reversed by stress.

Aïcha Daher, Ghislaine Laraki, Madhurima Singh, Carlos E Melendez-Peña, Sylvie Bannwarth, Antoine H F M Peters, Eliane F Meurs, Robert E Braun, Rekha C Patel, Anne Gatignol

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 1 synthesis or guideline pooled it, 130 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
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  7. Review
  8. A frameshift mutation in the murinebioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Article
  11. RNA recognition by PKR during DNA virus infection.Journal of medical virology · 2024
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Regulation of PKR activation and apoptosis during oxidative stress by TRBP phosphorylation.The international journal of biochemistry & cell biology · 2021
    Article
  18. Article
  19. Article
  20. Review

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Aïcha DaherVirus-Cell Interactions Laboratory, Lady Davis Institute for Medical Research, Montréal, Québec, Canada.
Ghislaine Laraki
Madhurima Singh
Carlos E Melendez-Peña
Sylvie Bannwarth
Antoine H F M Peters
Eliane F Meurs
Robert E Braun
Rekha C Patel
Anne Gatignol
Bipar · FRUniversity of South Carolina · USUniversity of Washington · USInstitute for Medical Research · MYInstitut Pasteur · FR

Funding

TRANSLATIONAL REGULATION OF THE PROTAMINE 1 GENER01HD027215 · NICHD · UNIVERSITY OF WASHINGTON · PI BRAUN, ROBERT E · 1990 to 2010
$3.0M
REGULATION OF SMOOTH MUSCLE PROLIFERATIONR01HL063359 · NHLBI · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI PATEL, REKHA C · 2000 to 2003
$867k
NHLBI NIH HHS HL63359NHLBI NIH HHS R01 HL063359NICHD NIH HHS HD27215NICHD NIH HHS R01 HD027215
6 · The paper itself

Abstract

The TAR RNA binding Protein, TRBP, inhibits the activity of the interferon-induced protein kinase R (PKR), whereas the PKR activator, PACT, activates its function. TRBP and PACT also bind to each other through their double-stranded RNA binding domains (dsRBDs) and their Medipal domains, which may influence their activity on PKR. In a human immunodeficiency virus (HIV) long terminal repeat-luciferase assay, PACT unexpectedly reversed PKR-mediated inhibition of gene expression. In a translation inhibition assay in HeLa cells, PACT lacking the 13 C-terminal amino acids (PACTDelta13), but not full-length PACT, activated PKR and enhanced interferon-mediated repression. In contrast, in the astrocytic U251MG cells that express low TRBP levels, both proteins activate PKR, but PACTDelta13 is stronger. Immunoprecipitation assays and yeast two-hybrid assays show that TRBP and PACTDelta13 interact very weakly due to a loss of binding in the Medipal domain. PACT-induced PKR phosphorylation was restored in Tarbp2(-/-) murine tail fibroblasts and in HEK293T or HeLa cells when TRBP expression was reduced by RNA interference. In HEK293T and HeLa cells, arsenite, peroxide, and serum starvation-mediated stresses dissociated the TRBP-PACT interaction and increased PACT-induced PKR activation, demonstrating the relevance of this control in a physiological context. Our results demonstrate that in cells, TRBP controls PACT activation of PKR, an activity that is reversed by stress.

Indexed as

Stress, PhysiologicalAnimalsAntigens, Polyomavirus TransformingAstrocytesCell LineeIF-2 KinaseEnzyme ActivationHIV Long Terminal RepeatHumansInterferonsMicePhosphorylationPromoter Regions, GeneticProtein BindingRNA-Binding ProteinsRNA InterferenceAntigens, Polyomavirus TransformingeIF-2 KinaseInterferonsPRKRA protein, humanPrkra protein, mouseRNA-Binding ProteinsTrans-Activation Responsive RNA-Binding Protein

Identifiers

PMID18936160
PMCPMC2612476
OpenAlexW2145039804

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.