Evidence map›Paper›PMID 18931787›Full record

ArticleMolecular bioSystems2008

Phosphorylation of the Gal4 DNA-binding domain is essential for activator mono-ubiquitylation and efficient promoter occupancy.

Anwarul Ferdous, Melissa O'Neal, Kip Nalley, Devanjan Sikder, Thomas Kodadek, Stephen Albert Johnston

Abstract read
In one paragraph

Article in Molecular bioSystems, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Regulation of gene expression by the ubiquitin-proteasome system.Seminars in cell & developmental biology · 2012
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Anwarul FerdousDepartments of Internal Medicine, Molecular Biology and Microbiology, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, TX 75390-9185, USA.
Melissa O'Neal
Kip Nalley
Devanjan Sikder
Thomas Kodadek
Stephen Albert Johnston
Southwestern Medical Center · US

Funding

TRAINING IN CARDIOVASCULAR RESEARCHT32HL007360 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI HILL, JOSEPH A · 1985 to 2012
$11.8M
Post-translational modification of activatorsR01GM071833 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI KODADEK, THOMAS J. · 2004 to 2008
$1.4M
NHLBI NIH HHS HL-07360NHLBI NIH HHS T32 HL007360NIGMS NIH HHS GM-71833NIGMS NIH HHS R01 GM071833
6 · The paper itself

Abstract

Recent analysis of a Gal4 mutant (Gap71) carrying three point mutations (S22D, K23Q and K25F) in its DNA-binding domain (DBD), has demonstrated that it cannot occupy GAL promoters efficiently in cells and that it is not mono-ubiquitylated, suggesting a functional link between this modification and stable DNA binding in cells. The mechanistic underpinning of this phenotype is that this protein is hypersensitive to a newly discovered activity of the proteasomal ATPases--their ability to actively dissociate transcription factor-DNA complexes after direct interaction with the activation domain. In this paper, we examine the roles of each of the three point mutations contained in Gap71 individually. These experiments have revealed that serine 22 is a site of phosphorylation in the Gal4 DBD and that lysine 23 is essential for S22 phosphorylation, possibly acting as part of the kinase recognition site. Mutation of either residue blocks Gal4 DBD phosphorylation, its subsequent ubiquitylation and compromises the ability of the activator to bind promoter DNA in vivo. These data represent the first report of an essential phosphorylation event that is critical for the activity of this paradigmatic transcription factor.

Indexed as

Promoter Regions, GeneticBinding SitesDNADNA-Binding ProteinsHeLa CellsHumansLysineModels, MolecularPhosphorylationPoint MutationProtein Structure, TertiarySaccharomyces cerevisiae ProteinsSerineTranscription FactorsUbiquitinationDNADNA-Binding ProteinsGAL4 protein, S cerevisiaeLysineSaccharomyces cerevisiae ProteinsSerineTranscription Factors

Identifiers

PMID18931787
PMCPMC4451857
OpenAlexW2025435904

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.