Evidence map›Paper›PMID 18931136›Full record

ArticleJournal of bacteriology2009

Regulation of hemin binding proteins by a novel transcriptional activator in Porphyromonas gingivalis.

Jie Wu, Xinghua Lin, Hua Xie

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Silent signals: howFrontiers in oral health · 2024
    Review
  6. Article
  7. [Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2022
    Review
  8. Article
  9. TrkA serves as a virulence modulator inFrontiers in cellular and infection microbiology · 2022
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Role and regulation of heme iron acquisition in gram-negative pathogens.Frontiers in cellular and infection microbiology · 2013
    Review
  18. Article
  19. Review
  20. Antibacterial action of polyphosphate on Porphyromonas gingivalis.Antimicrobial agents and chemotherapy · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jie WuSchool of Dentistry, Meharry Medical College, Nashville, TN 37208, USA.
Xinghua Lin
Hua Xie
Meharry Medical College · US

Funding

Intergeneric Signaling Molecules of S. cristatusR01DE014699 · NIDCR · MEHARRY MEDICAL COLLEGE · PI XIE, HUA · 2004 to 2008
$858k
NIDCR NIH HHS DE014699NIDCR NIH HHS R01 DE014699
6 · The paper itself

Abstract

One of the features of the periodontal pathogen Porphyromonas gingivalis is the presence of complex iron acquisition systems that include an hmuYRSTUV locus. HmuY and HmuR are hemin binding proteins required for P. gingivalis growth. Previous studies have demonstrated that expression of the hmu locus is regulated in response to environmental changes, such as growth phases. However, the mechanisms involved in hmu gene regulation are poorly understood. Here we report that a novel transcriptional activator, PG1237, is required for the expression of humY and humR, but not other iron acquisition-related genes, such as fetB and tlr, which also encode hemin binding proteins. Real-time reverse transcription-PCR analysis revealed that a mutation in the pg1237 gene decreased expression of hmuY and hmuR 149- and 25-fold, respectively, compared to that observed in the wild-type strain. In addition, differential expression of hmuY, hmuR, and the pg1237 gene was found to be quorum-sensing dependent, such that higher expression levels of these genes were observed when P. gingivalis was grown at a lower cell density, such as that seen during the early exponential growth phase. This work demonstrates the involvement of a novel transcriptional activator, PG1237, in expression of the hmu operon in a cell density-dependent fashion.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsCarrier ProteinsDNA PrimersGenome, BacterialGingivaHeme-Binding ProteinsHemeproteinsHeminHemoglobinsHumansIronKineticsPlasmidsPorphyromonas gingivalisReverse Transcriptase Polymerase Chain ReactionBacterial ProteinsCarrier ProteinsDNA PrimersHeme-Binding ProteinsHemeproteinsHeminHemoglobinsIronRNA, BacterialTrans-ActivatorsTransferrin

Identifiers

PMID18931136
PMCPMC2612430
OpenAlexW2148103346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.