Evidence map›Paper›PMID 18930112›Full record

ArticleMolecular and cellular endocrinology2008

Complex actions of thyroid hormone receptor antagonist NH-3 on gene promoters in different cell lines.

Vanya Shah, Phuong Nguyen, Ngoc-Ha Nguyen, Marie Togashi, Thomas S Scanlan, John D Baxter, Paul Webb

Abstract read
In one paragraph

Article in Molecular and cellular endocrinology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Article
  5. Review
  6. Inhibition of thyroid hormone receptor locally in the retina is a therapeutic strategy for retinal degeneration.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2017
    Article
  7. Article
  8. Article
  9. Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Vanya ShahDiabetes Center, University of California, San Francisco, CA 94143, USA.
Phuong Nguyen
Ngoc-Ha Nguyen
Marie Togashi
Thomas S Scanlan
John D Baxter
Paul Webb
University of California, San Francisco · USHouston Methodist · USMethodist Hospital · USOregon Health & Science University · USUniversidade de Brasília · BR

Funding

Thyroid Hormone ActionR01DK052798 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SCANLAN, THOMAS STERLING · 1997 to 2020
$5.7M
THYROID HORMONE RECEPTORR01DK041842 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WEBB, PAUL · 1989 to 2011
$2.8M
MUTATION ANALYSIS OF THYROID RECEPTOR FUNCTIONR01DK051281 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BAXTER, JOHN D · 1996 to 2009
$2.6M
Thyroid Hormone ActionR56DK052798 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI SCANLAN, THOMAS STERLING · 2009 to 2021
$581k
NIDDK NIH HHS DK51281NIDDK NIH HHS DK52798NIDDK NIH HHS DK61468NIDDK NIH HHS R01 DK041842NIDDK NIH HHS R01 DK052798
6 · The paper itself

Abstract

It is desirable to obtain new antagonists for thyroid hormone receptors (TRs) and other nuclear receptors (NRs). We previously used X-ray structural models of TR ligand binding domains (LBDs) to design compounds, such as NH-3, that impair coactivator binding to activation function 2 (AF-2) and block thyroid hormone (triiodothyronine, T(3)) actions. However, TRs bind DNA and are transcriptionally active without ligand. Thus, NH-3 could modulate TR activity via effects on other coregulator interaction surfaces, such as activation function (AF-1) and corepressor binding sites. Here, we find that NH-3 blocks TR-LBD interactions with coactivators and corepressors and also inhibits activities of AF-1 and AF-2 in transfections. While NH-3 lacks detectable agonist activity at T(3)-activated genes in GC pituitary cells it nevertheless activates spot 14 (S14) in HTC liver cells with the latter effect accompanied by enhanced histone H4 acetylation and coactivator recruitment at the S14 promoter. Surprisingly, T(3) promotes corepressor recruitment to target promoters. NH-3 effects vary; we observe transient recruitment of N-CoR to S14 in GC cells and dismissal and rebinding of N-CoR to the same promoter in HTC cells. We propose that NH-3 will generally behave as an antagonist by blocking AF-1 and AF-2 but that complex effects on coregulator recruitment may result in partial/mixed agonist effects that are independent of blockade of T(3) binding in some contexts. These properties could ultimately be utilized in drug design and development of new selective TR modulators.

Indexed as

AcetatesAcetylationCell LineGene Expression RegulationHistonesHumansModels, BiologicalNuclear ProteinsNuclear Receptor Co-Repressor 1PhenoxyacetatesPromoter Regions, GeneticProtein BindingProtein Structure, TertiaryReceptors, Thyroid HormoneRepressor ProteinsTrans-Activators(4-(4-hydroxy-3-isopropyl-5-(4-nitrophenylethynyl)benzyl)-3,5-dimethylphenoxy)acetic acidAcetatesHistonesNCOR1 protein, humanNuclear ProteinsNuclear Receptor Co-Repressor 1PhenoxyacetatesReceptors, Thyroid HormoneRepressor ProteinsTHRSP protein, humanTrans-ActivatorsTranscription Factors

Identifiers

PMID18930112
PMCPMC4180716
OpenAlexW2045398258

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.