Evidence map›Paper›PMID 18929581›Full record

ArticleMutation research2008

UV but not X rays stimulate homologous recombination between sister chromatids and homologs in a Saccharomyces cerevisiae mec1 (ATR) hypomorphic mutant.

Michael Fasullo, Mingzeng Sun

Open access · greenAbstract read
In one paragraph

Article in Mutation research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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  5. BothAIMS genetics · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Michael FasulloOrdway Research Institute, Albany, NY 12208, USA. mfasullo@ordwayresearch.org
Mingzeng Sun
Albany Research Institute · US

Funding

RADIATION INDUCTION OF GENOMIC REARRANGEMENTS IN YEASTR01CA070105 · NCI · ORDWAY RESEARCH INSTITUTE, INC. · PI FASULLO, MICHAEL THOMAS · 2000 to 2004
$1.1M
RADIATION INDUCTION OF GENOMIC REARRANGEMENTS IN YEASTR29CA070105 · NCI · LOYOLA UNIVERSITY CHICAGO · PI FASULLO, MICHAEL THOMAS · 1995 to 1999
–
NCI NIH HHS CA70105NCI NIH HHS R01 CA070105NCI NIH HHS R29 CA070105
6 · The paper itself

Abstract

MEC1, the essential yeast ATM/ATR homolog, prevents replication fork collapse and is required for the cellular response to DNA damage. We had previously observed higher rates of spontaneous SCE, heteroallelic recombination and translocations in mec1-21 mutants, which still retain some G2 checkpoint function, compared to mec1 null mutants, which are completely defective in checkpoint function, and wild type. However, the types of DNA lesions that are more recombinogenic in mec1-21, compared to wild type, are unknown. Here, we measured DNA damage-associated SCE, homolog (heteroallelic) recombination, and homology-directed translocations in mec1-21, and characterized types of DNA damage-associated chromosomal rearrangements that occur in mec1-21. Although frequencies of UV-associated recombination were higher in mec1-21, the mutant was defective in double-strand break-associated SCE and heteroallelic recombination. Over-expression of Rad53 in mec1-21 reduced UV-associated recombination but did not suppress the defect in X-ray-associated recombination. Both X ray and UV exposure increased translocation frequencies in mec1-21, but the majority of the UV-associated products were non-reciprocal translocations. We suggest that although recombinational repair of double-stand breaks is less efficient in mec1 mutants, recombinants may be generated by other mechanisms, such as break-induced replication.

Indexed as

Ultraviolet RaysX-RaysCell Cycle ProteinsCheckpoint Kinase 2Chromosomes, FungalDeoxyribonucleases, Type II Site-SpecificGene Expression Regulation, FungalIntracellular Signaling Peptides and ProteinsModels, BiologicalOrganisms, Genetically ModifiedProtein Serine-Threonine KinasesRecombination, GeneticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence HomologySister Chromatid ExchangeCell Cycle ProteinsCheckpoint Kinase 2Deoxyribonucleases, Type II Site-SpecificHO protein, S cerevisiaeIntracellular Signaling Peptides and ProteinsMEC1 protein, S cerevisiaeProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID18929581
PMCPMC2685076
OpenAlexW2066502294

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.