Evidence map›Paper›PMID 18929555›Full record

ArticleDevelopmental biology2009

Combinatorial roles for zebrafish retinoic acid receptors in the hindbrain, limbs and pharyngeal arches.

Angela Linville, Kelly Radtke, Joshua S Waxman, Deborah Yelon, Thomas F Schilling

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
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  9. Review
  10. Article
  11. Retinoic acid signaling pathways.Development (Cambridge, England) · 2019
    Review
  12. Review
  13. Hindbrain induction and patterning during early vertebrate development.Cellular and molecular life sciences : CMLS · 2019
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Input overload: Contributions of retinoic acid signaling feedback mechanisms to heart development and teratogenesis.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Angela LinvilleDepartment of Developmental and Cell Biology, Developmental Biology Center, University of California, Irvine, CA 92697, USA.
Kelly Radtke
Joshua S Waxman
Deborah Yelon
Thomas F Schilling
University of California, Irvine · USNew York University · US

Funding

Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI BARDWELL, LEE S · 2007 to 2016
$25.1M
THE ROLE OF ATROPHIN-2 IN CARTILAGE PATTERNING AND POLARITY IN ZEBRAFISHR01DE013828 · NIDCR · UNIVERSITY OF CALIFORNIA-IRVINE · PI SCHILLING, THOMAS F · 2001 to 2025
$9.1M
Retinoid Signaling in Neural Patterning in ZebrafishR01NS041353 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI SCHILLING, THOMAS F · 2001 to 2009
$2.4M
NIGMS NIH HHS P50 GM076516NINDS NIH HHS R01 NS041353NINDS NIH HHS R01NS41353
6 · The paper itself

Abstract

Retinoic acid (RA) signaling regulates multiple aspects of vertebrate embryonic development and tissue patterning, in part through the local availability of nuclear hormone receptors called retinoic acid receptors (RARs) and retinoid receptors (RXRs). RAR/RXR heterodimers transduce the RA signal, and loss-of-function studies in mice have demonstrated requirements for distinct receptor combinations at different stages of embryogenesis. However, the tissue-specific functions of each receptor and their individual contributions to RA signaling in vivo are only partially understood. Here we use morpholino oligonucleotides to deplete the four known zebrafish RARs (raraa, rarab, rarga, and rargb). We show that while all four are required for anterior-posterior patterning of rhombomeres in the hindbrain, there are unique requirements for rarga in the cranial mesoderm for hindbrain patterning, and rarab in lateral plate mesoderm for specification of the pectoral fins. In addition, the alpha subclass (raraa, rarab) is RA inducible, and of these only raraa expression is RA-dependent, suggesting that these receptors establish a region of particularly high RA signaling through positive-feedback. These studies reveal novel tissue-specific roles for RARs in controlling the competence and sensitivity of cells to respond to RA.

Indexed as

AnimalsAnimal StructuresBody PatterningBranchial RegionEmbryo, NonmammalianExtremitiesGene Expression ProfilingGene Expression Regulation, DevelopmentalHomeodomain ProteinsModels, BiologicalOrgan SpecificityReceptors, Retinoic AcidRhombencephalonTretinoinZebrafishHomeodomain ProteinsReceptors, Retinoic AcidTretinoin

Identifiers

PMID18929555
PMCPMC3045866
OpenAlexW2050519964

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.