Evidence map›Paper›PMID 18923437›Full record

ArticleLeukemia2009

Heterogeneous patterns of amplification of the NUP214-ABL1 fusion gene in T-cell acute lymphoblastic leukemia.

C Graux, M Stevens-Kroef, M Lafage, N Dastugue, C J Harrison, F Mugneret, K Bahloula, S Struski, M J Grégoire, N Nadal and 17 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. Annals of laboratory medicine · 2024
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  7. Detection ofBlood research · 2022
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  11. Clinico-Hematological Profile and Copy Number Abnormalities in a Cohort ofIndian journal of hematology & blood transfusion : an official journal of Indian Society of Hematology and Blood Transfusion · 2021
    Article
  12. Review
  13. Case Report: The First Report ofFrontiers in oncology · 2021
    Article
  14. Review
  15. The Genetics and Mechanisms of T-Cell Acute Lymphoblastic Leukemia.Cold Spring Harbor perspectives in medicine · 2020
    Review
  16. Detection of a crypticCold Spring Harbor molecular case studies · 2019
    Article
  17. Article
  18. Aberrant Signaling Pathways in T-Cell Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2017
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 13 institutions in 4 countries.

C GrauxHematologic Section of the Human Genetics Centre, Cliniques universitaires UCL Saint-Luc, Brussels, Belgium. carlos.graux@uclouvain.be
M Stevens-Kroef
M Lafage
N Dastugue
C J Harrison
F Mugneret
K Bahloula
S Struski
M J Grégoire
N Nadal
E Lippert
S Taviaux
A Simons
R P Kuiper
A V Moorman
K Barber
A Bosly
L Michaux
P Vandenberghe
I Lahortiga
K De Keersmaecker
I Wlodarska
J Cools
A Hagemeijer
H A Poirel
Groupe Francophone de Cytogénétique Hématologique
Belgian Cytogenetic Group for Hematology and Oncology
KU Leuven · BECliniques Universitaires Saint-Luc · BENewcastle University · GBRadboud University Medical Center · NLCentre Hospitalier Régional et Universitaire de Nancy · FRCentre Hospitalier Universitaire de Bordeaux · FRCHU Dinant Godinne UCL Namur · BEHôpital Arnaud de Villeneuve · FRHôpital d'Hautepierre · FRHôpital Nord · FRHôpital Purpan · FRRadboud University Nijmegen · NLUniversity of Southampton · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Episomes with the NUP214-ABL1 fusion gene have been observed in 6% of T-ALL. In this multicentric study we collected 27 cases of NUP214-ABL1-positive T-ALL. Median age was 15 years with male predominance. Outcome was poor in 12 patients. An associated abnormality involving TLX1 or TLX3 was found in all investigated cases. Fluorescent in situ hybridization revealed a heterogeneous pattern of NUP214-ABL1 amplification. Multiple episomes carrying the fusion were detected in 24 patients. Episomes were observed in a significant number of nuclei in 18 cases, but in only 1-5% of nuclei in 6. In addition, intrachromosomal amplification (small hsr) was identified either as the only change or in association with episomes in four cases and two T-ALL cell lines (PEER and ALL-SIL). One case showed insertion of apparently non-amplified NUP214-ABL1 sequences at 14q12. The amplified sequences were analyzed using array-based CGH.These findings confirm that the NUP214-ABL1 gene requires amplification for oncogenicity; it is part of a multistep process of leukemogenesis; and it can be a late event present only in subpopulations. Data also provide in vivo evidence for a model of episome formation, amplification and optional reintegration into the genome. Implications for the use of kinase inhibitors are discussed.

Indexed as

Gene AmplificationLeukemia-Lymphoma, Adult T-CellOncogene Proteins, FusionPrecursor Cell Lymphoblastic Leukemia-LymphomaAdolescentAdultCell Line, TumorChildChild, PreschoolFemaleHomeodomain ProteinsHumansMaleMiddle AgedPlasmidsProto-Oncogene ProteinsHomeodomain ProteinsNUP214-ABL1 fusion protein, humanOncogene Proteins, FusionProto-Oncogene ProteinsTLX1 protein, humanTLX3 protein, human

Identifiers

PMID18923437
OpenAlexW2063668299

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.