Evidence map›Paper›PMID 18923396›Full record

ArticleNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology2009

A functional haplotype implicated in vulnerability to develop cocaine dependence is associated with reduced PDYN expression in human brain.

Vadim Yuferov, Fei Ji, David A Nielsen, Orna Levran, Ann Ho, Susan Morgello, Ruijin Shi, Jurg Ott, Mary Jeanne Kreek

Open access · bronzeAbstract read
In one paragraph

Article in Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 78 citations in OpenAlex.

  1. Role of microRNAs in the pathophysiology of addiction.Wiley interdisciplinary reviews. RNA · 2021
    Pooled it
  2. Trial
  3. Single-cell landscape of sex-specific drivers of Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  4. Genetic Variants inGenes · 2024
    Article
  5. Article
  6. Review
  7. Sex differences in neural mechanisms mediating reward and addiction.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2019
    Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Gender-specific association of functionalNeuropsychiatric disease and treatment · 2018
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Vadim YuferovLaboratory of the Biology of Addictive Diseases, The Rockefeller University, New York, NY 10065, USA. yuferov@rockefeller.edu
Fei Ji
David A Nielsen
Orna Levran
Ann Ho
Susan Morgello
Ruijin Shi
Jurg Ott
Mary Jeanne Kreek
Rockefeller University · USMount Sinai Medical Center · USBeijing Institute of Genomics · CN

Funding

TRANSFORMING TRANSLATIONAL SCIENCE AND EDUCATION TO BENEFIT HUMAN HEALTHUL1RR024143 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 2006 to 2011
$49.1M
VESICULAR LOCALIZATION AND FUNCTION OF PRESENILIN 1 FRAGMENTP50AG005138 · NIA · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI SCHIMMING, CORBETT · 1985 to 2019
$37.9M
ULTRASTUCTURE, RECEPTORS, AND GENE EXPRESSIONP60DA005130 · NIDA · ROCKEFELLER UNIVERSITY · PI KREEK, MARY J · 2002 to 2012
$30.6M
The Manahattan HIV Brain BankR24MH059724 · NIMH · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI MORGELLO, SUSAN · 1998 to 2007
$15.4M
UNIQUE RNA STRUCTURE OF CAUSATIVE AGENT FOR DELTA HEPATITISP50DA005130 · NIDA · ROCKEFELLER UNIVERSITY · PI KREEK, MARY J · 1987 to 2001
$5.0M
National NeuroAIDS Tissue Consortium Statistics and Data Coordinating CenterU01MH083545 · NIMH · INDIANA UNIVERSITY INDIANAPOLIS · PI YIANNOUTSOS, CONSTANTIN THEODORE · 2008 to 2012
$3.3M
HIV and Psychiatric Comorbidity: Selected Genetic and Epigenetic FactorsR01MH079880 · NIMH · ROCKEFELLER UNIVERSITY · PI KREEK, MARY J · 2006 to 2010
$3.0M
LINKAGE ANALYSIS METHODS IN SCHIZOPHRENIAR01MH044292 · NIMH · ROCKEFELLER UNIVERSITY · PI OTT, JURG · 1989 to 2008
$1.3M
LINKAGE ANALYSIS METHODS IN SCHIZOPHRENIAR37MH044292 · NIMH · ROCKEFELLER UNIVERSITY · PI OTT, JURG · 1993 to 2002
$788k
NCRR NIH HHS RR024143NCRR NIH HHS UL1 RR024143NIA NIH HHS AG05138NIA NIH HHS P50 AG005138NIDA NIH HHS P50 DA005130NIDA NIH HHS P60 DA005130NIDA NIH HHS P60-DA05130NIMH NIH HHS R01 MH044292NIMH NIH HHS R01 MH079880NIMH NIH HHS R01- MH44292NIMH NIH HHS R01-MH79880NIMH NIH HHS R24 MH059724NIMH NIH HHS R24-MH59724NIMH NIH HHS R37 MH044292NIMH NIH HHS U01 MH083545
6 · The paper itself

Abstract

Dynorphin peptides and the kappa-opioid receptor are important in the rewarding properties of cocaine, heroin, and alcohol. We tested polymorphisms of the prodynorphin gene (PDYN) for association with cocaine dependence and cocaine/alcohol codependence. We genotyped six single nucleotide polymorphisms (SNPs), located in the promoter region, exon 4 coding, and 3' untranslated region, in 106 Caucasians and 204 African Americans who were cocaine dependent, cocaine/alcohol codependent, or controls. In Caucasians, we found point-wise significant associations of 3'UTR SNPs (rs910080, rs910079, and rs2235749) with cocaine dependence and cocaine/alcohol codependence. These SNPs are in high linkage disequilibrium, comprising a haplotype block. The haplotype CCT was significantly experiment-wise associated with cocaine dependence and with combined cocaine dependence and cocaine/alcohol codependence (false discovery rate, q=0.04 and 0.03, respectively). We investigated allele-specific gene expression of PDYN, using SNP rs910079 as a reporter, in postmortem human brains from eight heterozygous subjects, using SNaPshot assay. There was significantly lower expression for C allele (rs910079), with ratios ranging from 0.48 to 0.78, indicating lower expression of the CCT haplotype of PDYN in both the caudate and nucleus accumbens. Analysis of total PDYN expression in 43 postmortem brains also showed significantly lower levels of preprodynorphin mRNA in subjects having the risk CCT haplotype. This study provides evidence that a 3'UTR PDYN haplotype, implicated in vulnerability to develop cocaine addiction and/or cocaine/alcohol codependence, is related to lower mRNA expression of the PDYN gene in human dorsal and ventral striatum.

Indexed as

HaplotypesPolymorphism, Single NucleotideAlcohol-Related DisordersBlack or African AmericanBrainCocaine-Related DisordersEnkephalinsGene ExpressionGene FrequencyGenetic Predisposition to DiseaseHumansProtein PrecursorsRNA, MessengerWhite PeopleEnkephalinspreproenkephalinProtein PrecursorsRNA, Messenger

Identifiers

PMID18923396
PMCPMC2778041
OpenAlexW2027652863

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.