Evidence map›Paper›PMID 18922886›Full record

ArticleAmerican journal of physiology. Renal physiology2008

Retinoic acid-dependent activation of the polycystic kidney disease-1 (PKD1) promoter.

M Rafiq Islam, Sanjeev Puri, Marianna Rodova, Brenda S Magenheimer, Robin L Maser, James P Calvet

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Renal physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Vitamin A and retinoid signaling in the kidneys.Pharmacology & therapeutics · 2023
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

M Rafiq IslamDept. of Biochemistry and Molecular Biology, Univ. of Kansas Medical Center, MS3030, Kansas City, KS 66160, USA.
Sanjeev Puri
Marianna Rodova
Brenda S Magenheimer
Robin L Maser
James P Calvet
University of Kansas Medical Center · US

Funding

ROLE OF OXIDANT STRESS IN PROGRESSION OF PKDP50DK057301 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI CALVET, JAMES P · 1999 to 2009
$11.3M
Novel Mekk1-p53 mediated transcriptional regulation: mechanism and genome wide stR15DK069897 · NIDDK · NORTHWEST MISSOURI STATE UNIVERSITY · PI ISLAM, M. RAFIQ · 2005 to 2010
$404k
NIDDK NIH HHS P50-DK-057301NIDDK NIH HHS R15-DK-069897
6 · The paper itself

Abstract

The retinoic acids all-trans retinoic acid (AT-RA) and 9-cis retinoic acid (9C-RA) and the retinoic acid receptors RAR and RXR significantly induce transcriptional activity from a 200-bp PKD1 proximal promoter in transfected mammalian cells. This PKD1 promoter region contains Ets, p53, and GC box motifs, but lacks a canonical RAR/RXR motif. Mutagenesis of the Ets sites did not affect RA induction. In contrast, GC box mutations completely blocked stimulation by AT-RA and by RXRbeta or RARbeta. Mithramycin A, which prevents Sp1 binding, significantly reduced basal promoter activity and suppressed upregulation by AT-RA and RXR. The 200-bp proximal promoter could not be induced by AT-RA in Drosophila SL2 cells, which lack Sp1, but could be activated in these cells transfected with exogenous Sp1. Small interfering RNA knockdown of Sp1 in mammalian cells completely blocked RXRbeta upregulation of the promoter. These data indicate that induction of the PKD1 promoter by retinoic acid is mediated through Sp1 elements. RT-PCR showed that AT-RA treatment of HEK293T cells increased the levels of endogenous PKD1 RNA, and chromatin immunoprecipitation showed the presence of both RXR and Sp1 at the PKD1 proximal promoter. These results suggest that retinoids and their receptors may play a role in PKD1 gene regulation.

Indexed as

Promoter Regions, GeneticAnimalsBase SequenceCell LineDNA PrimersGenes, ReporterHumansKidneyLuciferasesMolecular Sequence DataPlasmidsReceptors, Retinoic AcidRetinoid X ReceptorsTranscriptional ActivationTretinoinTRPP Cation ChannelsDNA PrimersLuciferasesReceptors, Retinoic AcidRetinoid X ReceptorsTretinoinTRPP Cation Channels

Identifiers

PMID18922886
PMCPMC2604834
OpenAlexW2158102954

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.