Evidence map›Paper›PMID 18855673›Full record

ReviewCurrent medicinal chemistry2008

Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets.

Michele Ferrante, Kim T Blackwell, Michele Migliore, Giorgio A Ascoli

Abstract readReview
In one paragraph

Review in Current medicinal chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Review
  3. Cell morphologies in the nervous system: Glia steal the limelight.The Journal of comparative neurology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Functional impact of dendritic branch-point morphology.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2013
    Article
  16. Reaction-diffusion in the NEURON simulator.Frontiers in neuroinformatics · 2013
    Article
  17. Modeling of the nervous system: from modulation of glutamatergic and gabaergic molecular dynamics to neuron spiking activity.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2012
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michele FerranteKrasnow Institute for Advanced Study, George Mason University, 4400 University Drive, MS 2A1, Fairfax, Virginia 22030-4444, USA.
Kim T Blackwell
Michele Migliore
Giorgio A Ascoli

Funding

Generation and Description of Neuronal Morphology and ConnectivityR01NS039600 · NINDS · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 1999 to 2024
$6.9M
CRCNS: Spatio-temporal Dynamics of Dopamine Activated 2nd Messenger PathwaysR01AA016022 · NIAAA · GEORGE MASON UNIVERSITY · PI BLACKWELL, KIM L, LOVINGER, DAVID · 2005 to 2017
$2.6M
CRCNS: Spatial & Temporal Aspects of cAMP/PKA Signaling Underlying InformationR01AA018060 · NIAAA · GEORGE MASON UNIVERSITY · PI ABEL, EDWIN TED G., BLACKWELL, KIM L · 2008 to 2012
$1.8M
CRCNS: Input/Output Relationship in CA3 Pyramidal CellsR01AG025633 · NIA · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 2004 to 2008
$1.5M
NIAAA NIH HHS R01 AA016022NIAAA NIH HHS R01 AA018060NIAAA NIH HHS R01 AA16022NIA NIH HHS R01 AG025633NINDS NIH HHS R01 NS039600NINDS NIH HHS R01 NS396000
6 · The paper itself

Abstract

The identification and characterization of potential pharmacological targets in neurology and psychiatry is a fundamental problem at the intersection between medicinal chemistry and the neurosciences. Exciting new techniques in proteomics and genomics have fostered rapid progress, opening numerous questions as to the functional consequences of ligand binding at the systems level. Psycho- and neuro-active drugs typically work in nerve cells by affecting one or more aspects of electrophysiological activity. Thus, an integrated understanding of neuropharmacological agents requires bridging the gap between their molecular mechanisms and the biophysical determinants of neuronal function. Computational neuroscience and bioinformatics can play a major role in this functional connection. Robust quantitative models exist describing all major active membrane properties under endogenous and exogenous chemical control. These include voltage-dependent ionic channels (sodium, potassium, calcium, etc.), synaptic receptor channels (e.g. glutamatergic, GABAergic, cholinergic), and G protein coupled signaling pathways (protein kinases, phosphatases, and other enzymatic cascades). This brief review of neuromolecular medicine from the computational perspective provides compelling examples of how simulations can elucidate, explain, and predict the effect of chemical agonists, antagonists, and modulators in the nervous system.

Indexed as

Computer SimulationModels, NeurologicalNeuropharmacologyAnimalsBiophysical PhenomenaBiophysicsCombinatorial Chemistry TechniquesElectrophysiologyHumans

Identifiers

PMID18855673
PMCPMC3560392

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.