Evidence map›Paper›PMID 18854242›Full record

ArticleCell host & microbe2008

Mechanism of induction and suppression of antiviral immunity directed by virus-derived small RNAs in Drosophila.

Roghiyh Aliyari, Qingfa Wu, Hong-Wei Li, Xiao-Hong Wang, Feng Li, Lance D Green, Cliff S Han, Wan-Xiang Li, Shou-Wei Ding

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 157 papers.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed
21.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed, 253 citations in OpenAlex.

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  11. Temporal control of RNAi reveals both robust and labile feedback loops in the segmentation clock of the red flour beetle.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Argonaute-independent, Dicer-dependent antiviral defense against RNA viruses.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Infection Defects of RNA and DNA Viruses Induced by Antiviral RNA Interference.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Mammalian viral suppressors of RNA interference.Trends in biochemical sciences · 2022
    Review

97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Roghiyh AliyariDepartment of Plant Pathology and Microbiology, Institute for Integrative Genome Biology, University of California, Riverside, Riverside, CA 92521, USA.
Qingfa Wu
Hong-Wei Li
Xiao-Hong Wang
Feng Li
Lance D Green
Cliff S Han
Wan-Xiang Li
Shou-Wei Ding
University of California, Riverside · USLos Alamos National Laboratory · US

Funding

Gene Silencing as an Antiviral Defense in Animal CellsR01AI052447 · NIAID · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DING, SHOU-WEI · 2003 to 2016
$6.0M
NIAID NIH HHS AI052447NIAID NIH HHS R01 AI052447
6 · The paper itself

Abstract

The small RNA-directed viral immunity pathway in plants and invertebrates begins with the production by Dicer nuclease of virus-derived siRNAs (viRNAs), which guide specific antiviral silencing by Argonaute protein in an RNA-induced silencing complex (RISC). Molecular identity of the viral RNA precursor of viRNAs remains a matter of debate. Using Flock house virus (FHV) infection of Drosophila as a model, we show that replication of FHV positive-strand RNA genome produces an approximately 400 bp dsRNA from its 5' terminus that serves as the major Dicer-2 substrate. ViRNAs thus generated are loaded in Argonaute-2 and methylated at their 3' ends. Notably, FHV-encoded RNAi suppressor B2 protein interacts with both viral dsRNA and RNA replicase and inhibits production of the 5'-terminal viRNAs. Our findings, therefore, provide a model in which small RNA-directed viral immunity is induced during the initiation of viral progeny (+)RNA synthesis and suppressed by B2 inside the viral RNA replication complex.

Indexed as

Gene SilencingAnimalsArgonaute ProteinsDrosophilaDrosophila ProteinsMethylationModels, BiologicalNodaviridaeRibonuclease IIIRNA, Double-StrandedRNA HelicasesRNA-Induced Silencing ComplexRNA Processing, Post-TranscriptionalRNA, Small InterferingRNA, ViralRNA Virus InfectionsAGO2 protein, DrosophilaArgonaute ProteinsDCR-2 protein, DrosophilaDrosophila ProteinsRibonuclease IIIRNA, Double-StrandedRNA HelicasesRNA-Induced Silencing ComplexRNA, Small InterferingRNA, Viral

Identifiers

PMID18854242
PMCPMC2584229
OpenAlexW2040316830

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.