Evidence map›Paper›PMID 18849567›Full record

ArticleThe Journal of biological chemistry2008

A novel germ cell-specific protein, SHIP1, forms a complex with chromatin remodeling activity during spermatogenesis.

Eunyoung Choi, Cecil Han, Inju Park, Boyeon Lee, Sora Jin, Heejin Choi, Do Han Kim, Zee Yong Park, Edward M Eddy, Chunghee Cho

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 48 citations in OpenAlex.

  1. Trial
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  4. Andrology · 2025
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  11. Review
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  13. Selection for bull fertility: a review.Translational animal science · 2020
    Review
  14. Histone deacetylase function in CD4Nature reviews. Immunology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Eunyoung ChoiDepartment of Life Science and Research Center for Biomolecular Nanotechnology, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea.
Cecil Han
Inju Park
Boyeon Lee
Sora Jin
Heejin Choi
Do Han Kim
Zee Yong Park
Edward M Eddy
Chunghee Cho
Gwangju Institute of Science and Technology · KRNational Institute of Environmental Health Sciences · USTriangle · US

Funding

Gene Expression In Spermatogenic CellsZIAES070076 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI EDDY, EDWARD MITCHELL · 2009 to 2014
$12.6M
GERM CELL-SPECIFIC MOLECULES OF SPERMATOZOAZ01ES070076 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI EDDY, EDWARD MITCHELL · 1985 to 2008
$4.6M
Intramural NIH HHS
6 · The paper itself

Abstract

To determine the mechanisms of spermatogenesis, it is essential to identify and characterize germ cell-specific genes. Here we describe a protein encoded by a novel germ cell-specific gene, Mm.290718/ZFP541, identified from the mouse spermatocyte UniGene library. The protein contains specific motifs and domains potentially involved in DNA binding and chromatin reorganization. An antibody against Mm.290718/ZFP541 revealed the existence of the protein in testicular spermatogenic cells (159 kDa) but not testicular and mature sperm. Immunostaining analysis of cells at various stages of spermatogenesis consistently showed that the protein is present in spermatocytes and round spermatids only. Transfection assays and immunofluorescence studies indicate that the protein is localized specifically in the nucleus. Proteomic analyses performed to explore the functional characteristics of Mm.290718/ZFP541 showed that the protein forms a unique complex. Other major components of the complex included histone deacetylase 1 (HDAC1) and heat-shock protein A2. Disappearance of Mm.290718/ZFP541 was highly correlated with hyperacetylation in spermatids during spermatogenesis, and specific domains of the protein were involved in the regulation of interactions and nuclear localization of HDAC1. Furthermore, we found that premature hyperacetylation, induced by an HDAC inhibitor, is associated with an alteration in the integrity of Mm.290718/ZFP541 in spermatogenic cells. Our results collectively suggest that the Mm.290718/ZFP541 complex is implicated in chromatin remodeling during spermatogenesis, and we provide further information on the previously unknown molecular mechanism. Consequently, we re-designate Mm.290718/ZFP541 as "SHIP1" representing spermatogenic cell HDAC-interacting protein 1.

Indexed as

SpermatogenesisAmino Acid SequenceAnimalsBase SequenceCarrier ProteinsCell NucleusChromatinChromosomal Proteins, Non-HistoneHistone Deacetylase 1Histone DeacetylasesMaleMiceModels, BiologicalMolecular Sequence DataSequence Homology, Amino AcidSpermatozoaCarrier ProteinsChromatinChromosomal Proteins, Non-HistoneHdac1 protein, mouseHistone Deacetylase 1Histone DeacetylasesTranscription FactorsZFP541 protein, mouse

Identifiers

PMID18849567
PMCPMC2596390
OpenAlexW2026099958

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.