Evidence map›Paper›PMID 18849470›Full record

ArticleEukaryotic cell2008

Stem-loop silencing reveals that a third mitochondrial DNA polymerase, POLID, is required for kinetoplast DNA replication in trypanosomes.

Julian Chandler, Anthula V Vandoros, Brian Mozeleski, Michele M Klingbeil

Abstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  4. Review
  5. Biochemistry · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Julian ChandlerDepartment of Microbiology, University of Massachusetts, 639 North Pleasant Street, Amherst, MA 01003, USA.
Anthula V Vandoros
Brian Mozeleski
Michele M Klingbeil

Funding

Trypanosomatid Mitochondrial DNA PolymerasesR01AI066279 · NIAID · UNIVERSITY OF MASSACHUSETTS AMHERST · PI KLINGBEIL, MICHELE M · 2005 to 2008
$1.1M
NIAID NIH HHS AI066279NIAID NIH HHS R01 AI066279
6 · The paper itself

Abstract

Kinetoplast DNA (kDNA), the mitochondrial genome of trypanosomes, is a catenated network containing thousands of minicircles and tens of maxicircles. The topological complexity dictates some unusual features including a topoisomerase-mediated release-and-reattachment mechanism for minicircle replication and at least six mitochondrial DNA polymerases (Pols) for kDNA transactions. Previously, we identified four family A DNA Pols from Trypanosoma brucei with similarity to bacterial DNA Pol I and demonstrated that two (POLIB and POLIC) were essential for maintaining the kDNA network, while POLIA was not. Here, we used RNA interference to investigate the function of POLID in procyclic T. brucei. Stem-loop silencing of POLID resulted in growth arrest and the progressive loss of the kDNA network. Additional defects in kDNA replication included a rapid decline in minicircle and maxicircle abundance and a transient accumulation of minicircle replication intermediates before loss of the kDNA network. These results demonstrate that POLID is a third essential DNA Pol required for kDNA replication. While other eukaryotes utilize a single DNA Pol (Pol gamma) for replication of mitochondrial DNA, T. brucei requires at least three to maintain the complex kDNA network.

Indexed as

DNA ReplicationRNA InterferenceAnimalsDNA-Directed DNA PolymeraseDNA, KinetoplastMitochondriaMitochondrial ProteinsProtozoan ProteinsRNA, Double-StrandedTrypanosoma brucei bruceiDNA-Directed DNA PolymeraseDNA, KinetoplastMitochondrial ProteinsProtozoan ProteinsRNA, Double-Stranded

Identifiers

PMID18849470
PMCPMC2593185

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.