Evidence map›Paper›PMID 18844461›Full record

ArticleAIDS research and human retroviruses2008

HIV dynamics in seminal plasma during primary HIV infection.

Joanne Stekler, Brian J Sycks, Sarah Holte, Janine Maenza, Claire E Stevens, Joan Dragavon, Ann C Collier, Robert W Coombs

Open access · greenAbstract readComparative Study
In one paragraph

Article in AIDS research and human retroviruses, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
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  12. Review
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  14. Article
  15. HIV Trafficking Between Blood and Semen During Early Untreated HIV Infection.Journal of acquired immune deficiency syndromes (1999) · 2017
    Article
  16. Article
  17. Semen as the Way Forward to Understand HIV-1 Transmission.The Journal of infectious diseases · 2016
    Article
  18. Cell-to-Cell Spread of HIV and Viral Pathogenesis.Advances in virus research · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Joanne SteklerDepartment of Medicine, University of Washington, Seattle, Washington 98104, USA. jstekler@u.washington.edu
Brian J Sycks
Sarah Holte
Janine Maenza
Claire E Stevens
Joan Dragavon
Ann C Collier
Robert W Coombs
University of Washington · USFred Hutch Cancer Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
WOMEN'S HEALTH AGENDAU01AI038858 · NIAID · SOCIAL AND SCIENTIFIC SYSTEMS, INC. · PI BENSON, CONSTANCE ANN · 1996 to 2008
$157.5M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Kenneth Sherr · 1988 to 2026
$104.9M
Viral Determinants of HIV-1 Transmission in African HeterosexualsP01AI057005 · NIAID · UNIVERSITY OF WASHINGTON · PI COREY, LAWRENCE · 2003 to 2014
$20.5M
IMMUNOLOGY AND MOLECULAR VIROLOGY OF ACUTE HIV INFECTIONU01AI041535 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI COREY, LAWRENCE · 1997 to 2003
$6.0M
Mathematical and Experimental Models for HIV DynamicsR01AI055343 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HOLTE, SARAH E · 2003 to 2007
$1.7M
HIV SHEDDING IN SEMEN--CAUSES AND GU TRACT CONSEQUENCESR01DK049477 · NIDDK · UNIVERSITY OF WASHINGTON · PI KRIEGER, JOHN N · 1994 to 1997
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NCI NIH HHS P30 CA015704NIAID NIH HHS AI-27757NIAID NIH HHS AI-38858NIAID NIH HHS K23 AI-652438NIAID NIH HHS P01 AI057005NIAID NIH HHS P01 AI-57005NIAID NIH HHS R01 AI055343NIAID NIH HHS R01 AI-55343NIAID NIH HHS U01 AI041535NIAID NIH HHS U01 AI-41535NIDDK NIH HHS DK-49477
6 · The paper itself

Abstract

HIV dynamics in seminal plasma during primary HIV infection was evaluated through an observational study of individuals with primary HIV infection at the University of Washington Primary Infection Clinic. Seminal plasma HIV RNA was quantified using a real-time reverse transcription PCR assay. Blood plasma RNA was quantified by bDNA or PCR-based assays. Longitudinal analyses of HIV RNA levels over time used random effects regression analysis. From 1993 to 2005, 110 men collected 327 semen specimens. Initial blood and seminal plasma RNA levels in untreated men were only moderately correlated (Spearman r = 0.38, p = 0.0002). Estimated peak and set point levels were lower in semen than blood by 0.8 (p = 0.001) and 0.7 (p < 0.001) log(10) copies/ml, respectively. RNA decay rates were similar in the two compartments (p = 0.4). For 2 months after infection, mean HIV RNA levels in seminal plasma remained above a threshold level (3.8 log(10) copies/ml) that has been associated with recovery of infectious virus in vitro. HIV-positive men are likely to be most infectious in the first months following HIV acquisition. However, the modest relationship between HIV RNA levels in blood and seminal plasma suggests that the relative risk of HIV transmission during primary infection may vary from current estimates that are solely based on blood levels. Incorporating seminal plasma HIV levels into future mathematical models may increase the accuracy of these models.

Indexed as

Viral LoadAdultHIV-1HIV InfectionsHumansLongitudinal StudiesMaleReverse Transcriptase Polymerase Chain ReactionRNA, ViralSemenStatistics as TopicWashingtonRNA, Viral

Identifiers

PMID18844461
PMCPMC2928038
OpenAlexW2075247451

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.