Evidence map›Paper›PMID 18840262›Full record

ArticleBMC evolutionary biology2008

The evolution of TEP1, an exceptionally polymorphic immunity gene in Anopheles gambiae.

Darren J Obbard, Deborah M Callister, Francis M Jiggins, Dinesh C Soares, Guiyun Yan, Tom J Little

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 57 citations in OpenAlex.

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  8. Biomphalaria glabrata immunity: Post-genome advances.Developmental and comparative immunology · 2020
    Review
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  10. Review
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  14. Article
  15. Article
  16. Evolutionary genetics of insect innate immunity.Briefings in functional genomics · 2015
    Review
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Darren J ObbardInstitute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, West Mains Rd, Edinburgh EH9 3JT, UK. darren.obbard@ed.ac.uk
Deborah M Callister
Francis M Jiggins
Dinesh C Soares
Guiyun Yan
Tom J Little
University of Edinburgh · GBInstitut de Biologia Evolutiva · ESUniversity of California, Irvine · US

Funding

Wellcome Trust 073210Wellcome Trust 079235
6 · The paper itself

Abstract

backgroundHost-parasite coevolution can result in balancing selection, which maintains genetic variation in the susceptibility of hosts to parasites. It has been suggested that variation in a thioester-containing protein called TEP1 (AGAP010815) may alter the ability of Anopheles mosquitoes to transmit Plasmodium parasites, and high divergence between alleles of this gene suggests the possible action of long-term balancing selection. We studied whether TEP1 is a case of an ancient balanced polymorphism in an animal immune system.

resultsWe found evidence that the high divergence between TEP1 alleles is the product of genetic exchange between TEP1 and other TEP loci, i.e. gene conversion. Additionally, some TEP1 alleles showed unexpectedly low variability.

conclusionThe TEP1 gene appears to be a chimera produced from at least two other TEP loci, and the divergence between TEP1 alleles is probably not caused by long-term balancing selection, but is instead due to two independent gene conversion events from one of these other genes. Nevertheless, TEP1 still shows evidence of natural selection, in particular there appears to have been recent changes in the frequency of alleles that has diminished polymorphism within each allelic class. Although the selective force driving this dynamic was not identified, given that susceptibility to Plasmodium parasites is known to be associated with allelic variation in TEP1, these changes in allele frequencies could alter the vectoring capacity of populations.

Indexed as

Evolution, MolecularGene ConversionGenes, InsectAllelesAnimalsAnophelesDNAInsect ProteinsModels, GeneticPolymorphism, GeneticSelection, GeneticSequence AlignmentSequence Analysis, DNADNAInsect Proteins

Identifiers

PMID18840262
PMCPMC2576239
OpenAlexW1996173048

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.