Evidence map›Paper›PMID 18839129›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2009

Genomic regions influencing gene expression of the HMW glutenins in wheat.

Eric W Storlie, Robert J Ihry, Leslie M Baehr, Karissa A Tieszen, Jonathan H Engbers, Jordan M Anderson-Daniels, Elizabeth M Davis, Anne G Gilbertson, Niels R Harden, Kristina A Harris and 5 more

Open access · hybridAbstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. QTL mapping for quantities of protein fractions in bread wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 1 country.

Eric W StorlieDepartment of Biology, Augustana College, Sioux Falls, SD, 57197, USA.
Robert J Ihry
Leslie M Baehr
Karissa A Tieszen
Jonathan H Engbers
Jordan M Anderson-Daniels
Elizabeth M Davis
Anne G Gilbertson
Niels R Harden
Kristina A Harris
Amanda J Johnson
Amy M Kerkvleit
Matthew M Moldan
Megan E Bell
Michael K Wanous
Augustana University · USUniversity of Wisconsin–Madison · USBethel University · USCreighton University · USPennsylvania State University · USSt. Luke's Hospital · USUniversity of California, Davis · USUniversity of Iowa · USUniversity of North Dakota · USUniversity of South Dakota · US

Funding

WESTCORE DNA SEQUENCING AND GENOTYPING CORE FACILITYP20RR016479 · NCRR · UNIVERSITY OF SOUTH DAKOTA · PI GOODMAN, BARBARA EASON · 2001 to 2011
$32.2M
NCRR NIH HHS 2 P20 RR016479
6 · The paper itself

Abstract

Bread wheat (Triticum aestivum L.) produces glutenin storage proteins in the endosperm. The HMW glutenins confer distinct viscoelastic properties to bread dough. The genetics of HMW glutenin proteins have been extensively studied, and information has accumulated about individual subunits, chromosomal locations and DNA sequences, but little is known about the regulators of the HMW glutenins. This investigation addressed the question of glutenin regulators. Expression of the glutenins was analyzed using QRT-PCR in ditelosomic (dt) Chinese Spring (CS) lines. Primers were designed for each of 4 CS glutenin genes and a control, non-storage protein endosperm-specific gene Agp-L (ADP-glucose pyrophosphorylase). Each line represents CS wheat, lacking one chromosome arm. The effect of a missing arm could feasibly cause an increase, decrease or no change in expression. For each HMW glutenin, results indicated there were, on average, 8 chromosome arms with an up-regulatory effect and only one instance of a down-regulatory effect. There were significant correlations between orthologous and paralogous HMW glutenins for effects of chromosome groups B and D. Some or all the glutenin alleles shared regulatory loci on chromosome arms 2BS, 7BS, 4DS, 5DS and 6DS, and Agp-L shared regulatory loci with glutenins on arms 7AS, 7BS, 2DS, 3DS, 4DS and 5DS. These results suggest a few chromosome arms contain putative regulatory genes affecting the expression of conserved cis elements of 4 HMW glutenin and Agp-L genes in CS. Regulation by common genes implies the regulators have diverged little from the common wheat ancestor, and furthermore, some regulation may be shared by endosperm-specific-genes. Significant common regulators have practical implications.

Indexed as

Gene Expression Regulation, PlantGlutensPlant ProteinsReverse Transcriptase Polymerase Chain ReactionTriticumgluteninGlutensPlant Proteins

Identifiers

PMID18839129
OpenAlexW2132236646

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.