Evidence map›Paper›PMID 18837978›Full record

ArticleBMC microbiology2008

Cloning of the cytochrome p450 reductase (crtR) gene and its involvement in the astaxanthin biosynthesis of Xanthophyllomyces dendrorhous.

Jennifer Alcaíno, Salvador Barahona, Marisela Carmona, Carla Lozano, Andrés Marcoleta, Mauricio Niklitschek, Dionisia Sepúlveda, Marcelo Baeza, Víctor Cifuentes

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 93 citations in OpenAlex.

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  9. Unraveling the Molecular Basis of Mycosporine Biosynthesis in Fungi.International journal of molecular sciences · 2023
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  15. Carotenoids and Their Biosynthesis in Fungi.Molecules (Basel, Switzerland) · 2022
    Review
  16. Genomic Characterization of the Titan-like Cell ProducingJournal of fungi (Basel, Switzerland) · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jennifer AlcaínoDepartamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile. jennyalcaino@vtr.net
Salvador Barahona
Marisela Carmona
Carla Lozano
Andrés Marcoleta
Mauricio Niklitschek
Dionisia Sepúlveda
Marcelo Baeza
Víctor Cifuentes
University of Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe yeast Xanthophyllomyces dendrorhous synthesizes astaxanthin, a carotenoid with high commercial interest. The proposed biosynthetic route in this organism is isopentenyl-pyrophosphate (IPP) --> geranyleranyl pyrophosphate (GGPP) --> phytoene --> lycopene --> beta-carotene --> astaxanthin. Recently, it has been published that the conversion of beta-carotene into astaxanthin requires only one enzyme, astaxanthin synthase or CrtS, encoded by crtS gene. This enzyme belongs to the cytochrome P450 protein family.

resultsIn this work, a crtR gene was isolated from X. dendrorhous yeast, which encodes a cytochrome P450 reductase (CPR) that provides CrtS with the necessary electrons for substrate oxygenation. We determined the structural organization of the crtR gene and its location in the yeast electrophoretic karyotype. Two transformants, CBSTr and T13, were obtained by deleting the crtR gene and inserting a hygromycin B resistance cassette. The carotenoid composition of the transformants was altered in relation to the wild type strain. CBSTr forms yellow colonies because it is unable to produce astaxanthin, hence accumulating beta-carotene. T13 forms pale colonies because its astaxanthin content is reduced and its beta-carotene content is increased.

conclusionIn addition to the crtS gene, X. dendrorhous requires a novel gene, crtR, for the conversion of beta-carotene to astaxanthin.

Indexed as

Amino Acid SequenceBase SequenceBasidiomycotaChromatography, High Pressure LiquidCloning, MolecularDNA, FungalFungal ProteinsGene DeletionGene LibraryGenes, FungalKaryotypingMolecular Sequence DataMutationNADPH-Ferrihemoprotein ReductasePhylogenyPlasmidsastaxanthineDNA, FungalFungal ProteinsNADPH-Ferrihemoprotein ReductaseRNA, FungalXanthophylls

Identifiers

PMID18837978
PMCPMC2575211
OpenAlexW2134214894

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.