Evidence map›Paper›PMID 18835998›Full record

ArticleApplied and environmental microbiology2008

Expression profiles and physiological roles of two types of molecular chaperonins from the hyperthermophilic archaeon Thermococcus kodakarensis.

Shinsuke Fujiwara, Ryohei Aki, Masaya Yoshida, Hiroki Higashibata, Tadayuki Imanaka, Wakao Fukuda

Abstract read
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Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

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0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
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  13. Overview of the genetic tools in the Archaea.Frontiers in microbiology · 2012
    Article
  14. Article
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shinsuke FujiwaraDepartment of Bioscience, School of Science and Technology, Kwansei-Gakuin University, Sanda, Hyogo 669-1337, Japan. fujiwara-s@kwansei.ac.jp
Ryohei Aki
Masaya Yoshida
Hiroki Higashibata
Tadayuki Imanaka
Wakao Fukuda

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thermococcus kodakarensis possesses two chaperonins, CpkA and CpkB, and their expression is induced by the downshift and upshift, respectively, of the cell cultivation temperature. The expression levels of the chaperonins were examined by using specific antibodies at various cell growth temperatures in the logarithmic and stationary phases. At 60 degrees C, CpkA was highly expressed in both the logarithmic and stationary phases; however, CpkB was not expressed in either phase. At 85 degrees C, CpkA and CpkB were expressed in both phases; however, the CpkA level was decreased in the stationary phase. At 93 degrees C, CpkA was expressed only in the logarithmic phase and not in the stationary phase. In contrast, CpkB was highly expressed in both phases. The results of reverse transcription-PCR experiments showed the same growth phase- and temperature-dependent profiles as observed in immunoblot analyses, indicating that the expression of cpkA and cpkB is regulated at the mRNA level. The cpkA or cpkB gene disruptant was then constructed, and its growth profile was monitored. The cpkA disruptant showed poor cell growth at 60 degrees C but no significant defects at 85 degrees C and 93 degrees C. On the other hand, cpkB disruption led to growth defects at 93 degrees C but no significant defects at 60 degrees C and 85 degrees C. These data indicate that CpkA and CpkB are necessary for cell growth at lower and higher temperatures, respectively. The logarithmic-phase-dependent expression of CpkA at 93 degrees C suggested that CpkA participates in initial cell growth in addition to lower-temperature adaptation. Promoter mapping and quantitative analyses using the Phr (Pyrococcus heat-shock regulator) gene disruptant revealed that temperature-dependent expression was achieved in a Phr-independent manner.

Indexed as

Gene Expression ProfilingArchaeal ProteinsBase SequenceChaperoninsGene DeletionImmunoblottingMolecular ChaperonesMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionRNA, ArchaealSequence AlignmentThermococcusArchaeal ProteinsChaperoninsCpkA protein, archaealMolecular ChaperonesRNA, Archaeal

Identifiers

PMID18835998
PMCPMC2592908

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.